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DPYSL4 dihydropyrimidinase like 4 [ Gallus gallus (chicken) ]

Gene ID: 374022, updated on 17-Aug-2024

Summary

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Symbol
DPYSL4provided by CGNC
Full Name
dihydropyrimidinase like 4provided by CGNC
Primary source
CGNC:7977
See related
Ensembl:ENSGALG00010001506
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Also known as
CRMP3A; CRMP3B
Orthologs
human mouse all
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Genomic context

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See DPYSL4 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
15
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 6 NC_052537.1 (35654737..35666893)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 6 NC_052578.1 (35539706..35551832)

Chromosome 6 - NC_052537.1Genomic Context describing neighboring genes Neighboring gene BCL2 interacting protein 3 Neighboring gene Janus kinase and microtubule interacting protein 3 Neighboring gene serine/threonine kinase 32C Neighboring gene uncharacterized LOC101750475 Neighboring gene PWWP domain containing 2B

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Screening from a subtracted embryonic chick hindbrain cDNA library: identification of genes expressed during hindbrain, midbrain and cranial neural crest development. Christiansen JH, et al. Mech Dev, 2001 Apr. PMID 11287186
  2. Axonal morphogenesis controlled by antagonistic roles of two CRMP subtypes in microtubule organization. Yuasa-Kawada J, et al. Eur J Neurosci, 2003 Jun. PMID 12814366
  3. Molecular characterization of CRMP5, a novel member of the collapsin response mediator protein family. Fukada M, et al. J Biol Chem, 2000 Dec 1. PMID 10956643
  4. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  5. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dihydropyrimidinase-related protein 4
Names
collapsin response mediator protein-3A
collapsin response mediator protein-3B

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001389336.2 → NP_001376265.2  dihydropyrimidinase-related protein 4 isoform 1

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000232
    UniProtKB/TrEMBL
    A0A8V0X2Q2, Q71SG0
    Related
    ENSGALP00010001935.1, ENSGALT00010003493.1
    Conserved Domains (1) summary
    cd01314
    Location:96 → 545
    D-HYD; D-hydantoinases (D-HYD) also called dihydropyrimidases (DHPase) and related proteins; DHPases are a family of enzymes that catalyze the reversible hydrolytic ring opening of the amide bond in five- or six-membered cyclic diamides, like dihydropyrimidine ...

  2. NM_001389337.2 → NP_001376266.2  dihydropyrimidinase-related protein 4 isoform 2

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000232
    UniProtKB/TrEMBL
    A0A8V0X8X5, Q9DDZ6
    Related
    ENSGALP00010001923.1, ENSGALT00010003481.1
    Conserved Domains (1) summary
    cd01314
    Location:17 → 466
    D-HYD; D-hydantoinases (D-HYD) also called dihydropyrimidases (DHPase) and related proteins; DHPases are a family of enzymes that catalyze the reversible hydrolytic ring opening of the amide bond in five- or six-membered cyclic diamides, like dihydropyrimidine ...

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052537.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    35654737..35666893
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052578.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    35539706..35551832
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_204197.2: Suppressed sequence

    Description
    NM_204197.2: This RefSeq was removed because currently there is insufficient support for the transcript and the protein.
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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Research Materials