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CG33143 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

Gene ID: 37583, updated on 9-Dec-2024

Summary

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Official Symbol
CG33143provided by FlyBase
Official Full Name
uncharacterized proteinprovided by FlyBase
Primary source
FLYBASE:FBgn0053143
Locus tag
Dmel_CG33143
See related
AllianceGenome:FB:FBgn0053143
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
33143; CG13509; CG4232; Dmel\CG33143; mdcds_16487
Summary
Involved in positive regulation of macroautophagy. Is expressed in spermatozoon. [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
all
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Genomic context

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See CG33143 in Genome Data Viewer
Location:
58F2-58F2; 2-100 cM
Exon count:
10
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (22614328..22634084)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (18501833..18521589)

Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene Ribosomal protein S16 Neighboring gene Vacuolar protein sorting 20 Neighboring gene testes of unusual size Neighboring gene uncharacterized protein Neighboring gene Cyclin-dependent kinase 9 Neighboring gene bonsai Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Discovery of high-confidence human protein-coding genes and exons by whole-genome PhyloCSF helps elucidate 118 GWAS loci. Mudge JM, et al. Genome Res, 2019 Dec. PMID 31537640, Free PMC Article
  2. Iditarod, a Drosophila homolog of the Irisin precursor FNDC5, is critical for exercise performance and cardiac autophagy. Cobb T, et al. Proc Natl Acad Sci U S A, 2023 Sep 26. PMID 37722048, Free PMC Article
  3. The mapping of Drosophila melanogaster mutant A.4.4. Bieser K, et al. MicroPubl Biol, 2018 Dec 17. PMID 32550366, Free PMC Article
  4. Transcriptional Programs of Circuit Assembly in the Drosophila Visual System. Kurmangaliyev YZ, et al. Neuron, 2020 Dec 23. PMID 33125872
  5. Genomic mapping of Suppressor of Hairy-wing binding sites in Drosophila. Adryan B, et al. Genome Biol, 2007. PMID 17705839, Free PMC Article

See all (26) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Iditarod, a Drosophila homolog of the Irisin precursor FNDC5, is critical for exercise performance and cardiac autophagy.
    Title: Iditarod, a Drosophila homolog of the Irisin precursor FNDC5, is critical for exercise performance and cardiac autophagy.
Submit: New GeneRIF Correction

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by FlyBase

Process Evidence Code Pubs
involved_in positive regulation of macroautophagy IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in positive regulation of macroautophagy IGI
Inferred from Genetic Interaction
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein
Names
CG33143-PC
CG33143-PD
CG33143-PE
CG33143-PG

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033778.4 Reference assembly

    Range
    22614328..22634084
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_176246.2 → NP_788426.1  uncharacterized protein Dmel_CG33143, isoform C [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_788426.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q8MMF1, Q8SWQ8
    Related
    FBpp0071769
    Conserved Domains (2) summary
    cd00063
    Location:19 → 95
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam16066
    Location:167 → 286
    DUF4808; Domain of unknown function (DUF4808)

  2. NM_001382063.1 → NP_001368934.1  uncharacterized protein Dmel_CG33143, isoform G [Drosophila melanogaster]

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9W233
    Conserved Domains (2) summary
    cd00063
    Location:19 → 93
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam16066
    Location:165 → 230
    DUF4808; Domain of unknown function (DUF4808)

  3. NM_001299803.1 → NP_001286732.1  uncharacterized protein Dmel_CG33143, isoform D [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001286732.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A0B4LGA0
    Conserved Domains (2) summary
    cd00063
    Location:19 → 93
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam16066
    Location:165 → 323
    DUF4808; Domain of unknown function (DUF4808)

  4. NM_001299804.1 → NP_001286733.1  uncharacterized protein Dmel_CG33143, isoform E [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001286733.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A0B4LGC7
    Conserved Domains (2) summary
    cd00063
    Location:19 → 93
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam16066
    Location:165 → 300
    DUF4808; Domain of unknown function (DUF4808)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
A0A0B4LGA0 A0A0B4LGA0
A0A0B4LGC7 A0A0B4LGC7
Q8SWQ8 Q8SWQ8
Q95T67 Q95T67
Q9W233 Q9W233

Gene LinkOut

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