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CG13511 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

Gene ID: 37597, updated on 9-Dec-2024

Summary

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Official Symbol
CG13511provided by FlyBase
Official Full Name
uncharacterized proteinprovided by FlyBase
Primary source
FLYBASE:FBgn0034759
Locus tag
Dmel_CG13511
See related
AllianceGenome:FB:FBgn0034759
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
Dmel\CG13511
Summary
Predicted to enable zinc ion binding activity. [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
all
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Genomic context

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See CG13511 in Genome Data Viewer
Location:
58F4-58F4; 2-100 cM
Exon count:
4
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (22657901..22661389)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (18545406..18548894)

Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene antisense RNA:CR45268 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Novel protein domains and repeats in Drosophila melanogaster: insights into structure, function, and evolution. Ponting CP, et al. Genome Res, 2001 Dec. PMID 11731489
  2. Phenotypes Associated with Second Chromosome P Element Insertions in Drosophila melanogaster. Kahsai L, et al. G3 (Bethesda), 2016 Aug 9. PMID 27317776, Free PMC Article
  3. A Drosophila protein-interaction map centered on cell-cycle regulators. Stanyon CA, et al. Genome Biol, 2004. PMID 15575970, Free PMC Article
  4. Microbiota-induced changes in drosophila melanogaster host gene expression and gut morphology. Broderick NA, et al. mBio, 2014 May 27. PMID 24865556, Free PMC Article
  5. Cold acclimation wholly reorganizes the Drosophila melanogaster transcriptome and metabolome. MacMillan HA, et al. Sci Rep, 2016 Jun 30. PMID 27357258, Free PMC Article

See all (22) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables zinc ion binding IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
uncharacterized protein
Names
CG13511-PA
CG13511-PB

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033778.4 Reference assembly

    Range
    22657901..22661389
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001259537.2 → NP_001246466.1  uncharacterized protein Dmel_CG13511, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001246466.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    G2J5V0, Q9W220
    Conserved Domains (1) summary
    pfam10601
    Location:53 → 120
    zf-LITAF-like; LITAF-like zinc ribbon domain

  2. NM_137857.3 → NP_611701.1  uncharacterized protein Dmel_CG13511, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_611701.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    G2J5V0, Q9W220
    Related
    FBpp0071774
    Conserved Domains (1) summary
    pfam10601
    Location:53 → 120
    zf-LITAF-like; LITAF-like zinc ribbon domain
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9W220 Q9W220

Gene LinkOut

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