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CG42565 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

Gene ID: 37598, updated on 4-Jan-2025

Summary

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Official Symbol
CG42565provided by FlyBase
Official Full Name
uncharacterized proteinprovided by FlyBase
Primary source
FLYBASE:FBgn0260767
Locus tag
Dmel_CG42565
See related
AllianceGenome:FB:FBgn0260767
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CG13512; Dmel\CG42565
Old locus tag
Dmel_CG13512
Summary
Predicted to enable zinc ion binding activity. [provided by Alliance of Genome Resources, Jan 2025]
Orthologs
all
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Genomic context

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See CG42565 in Genome Data Viewer
Location:
58F4-58F4; 2-100 cM
Exon count:
4
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (22657901..22661389)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (18545406..18548894)

Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene antisense RNA:CR45268 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Fighting fly genes. Robin C, et al. Trends Genet, 2007 Feb. PMID 17188395
  2. Parallel and population-specific gene regulatory evolution in cold-adapted fly populations. Huang Y, et al. Genetics, 2021 Jul 14. PMID 33989401, Free PMC Article
  3. Evolutionary changes in cis and trans gene regulation. Wittkopp PJ, et al. Nature, 2004 Jul 1. PMID 15229602
  4. DmGTSF1 is necessary for Piwi-piRISC-mediated transcriptional transposon silencing in the Drosophila ovary. Ohtani H, et al. Genes Dev, 2013 Aug 1. PMID 23913921, Free PMC Article
  5. Spatial and temporal control of gene expression in Drosophila using the inducible GeneSwitch GAL4 system. I. Screen for larval nervous system drivers. Nicholson L, et al. Genetics, 2008 Jan. PMID 18202369, Free PMC Article

See all (32) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables zinc ion binding IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
uncharacterized protein
Names
CG42565-PA
CG42565-PB

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033778.4 Reference assembly

    Range
    22657901..22661389
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001299809.1 → NP_001286738.1  uncharacterized protein Dmel_CG42565, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001286738.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9W219
    Conserved Domains (1) summary
    pfam10601
    Location:72 → 135
    zf-LITAF-like; LITAF-like zinc ribbon domain

  2. NM_137858.3 → NP_611702.1  uncharacterized protein Dmel_CG42565, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_611702.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9W219
    Related
    FBpp0290484
    Conserved Domains (1) summary
    pfam10601
    Location:72 → 135
    zf-LITAF-like; LITAF-like zinc ribbon domain
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9W219 Q9W219

Gene LinkOut

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