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Putative membrane lipoprotein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 3768059, updated on 18-Sep-2024

Summary

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Official Full Name
Putative membrane lipoprotein
Primary source
TAIR:AT2G04034
Locus tag
AT2G04034
See related
Araport:AT2G04034
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Summary
Encodes a defensin-like (DEFL) family protein.
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Genomic context

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Location:
chromosome: 2
Exon count:
2
Sequence:
Chromosome: 2; NC_003071.7 (1297046..1297550)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene zinc transporter 7 precursor Neighboring gene miscRNA Neighboring gene pseudo Neighboring gene pseudo Neighboring gene prolamin-like protein (DUF784)

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

GeneRIFs: Gene References Into Functions

General gene information

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NM_001036238.2

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in extracellular region ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
Putative membrane lipoprotein
NP_001031315.1
  • Putative membrane lipoprotein; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: Putative membrane lipoprotein (TAIR:AT2G04925.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    1297046..1297550
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001036238.2 → NP_001031315.1  Putative membrane lipoprotein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001031315.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q2V4A4
    UniProtKB/TrEMBL
    A0A178VVR5, A0A654ERR4
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q2V4A4.1

Gene LinkOut

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Molecular Biology Databases
Research Materials