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GRP5 glycine-rich protein 5 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 3768804, updated on 18-Sep-2024

Summary

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Official Symbol
GRP5
Official Full Name
glycine-rich protein 5
Primary source
TAIR:AT3G20470
Locus tag
AT3G20470
See related
Araport:AT3G20470
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
ATGRP-5; ATGRP5; glycine-rich protein 5; GLYCINE-RICH PROTEIN 5; GRP-5
Summary
encodes a glycine-rich protein that is expressed more abundantly in immature seed pods than in stems and leaves. Expression is not detected in roots or flowers.
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Genomic context

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See GRP5 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
1
Sequence:
Chromosome: 3; NC_003074.8 (7140294..7141353, complement)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene B-cell receptor-associated protein 31-like protein Neighboring gene Major facilitator superfamily protein Neighboring gene MUTS-homologue 5 Neighboring gene tetraacyldisaccharide 4'-kinase family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The tissue expression pattern of the AtGRP5 regulatory region is controlled by a combination of positive and negative elements. Mangeon A, et al. Plant Cell Rep, 2010 May. PMID 20195610
  2. AtGRP5, a vacuole-located glycine-rich protein involved in cell elongation. Mangeon A, et al. Planta, 2009 Jul. PMID 19434422
  3. Glycine-rich proteins as structural components of plant cell walls. Ringli C, et al. Cell Mol Life Sci, 2001 Sep. PMID 11693524, Free PMC Article
  4. Expression of glycine-rich protein genes, AtGRP5 and AtGRP23, induced by the cutin monomer 16-hydroxypalmitic acid in Arabidopsis thaliana. Park JH, et al. Plant Physiol Biochem, 2008 Nov. PMID 18657431
  5. Differential expression of five Arabidopsis genes encoding glycine-rich proteins. de Oliveira DE, et al. Plant Cell, 1990 May. PMID 2152168, Free PMC Article

See all (6) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. AtGRP5 is expressed during zygotic embryogenesis. Multiple negative and positive regulatory elements are present in the AtGRP5 promoter and operate in order to confer its distinct expression pattern.
    Title: The tissue expression pattern of the AtGRP5 regulatory region is controlled by a combination of positive and negative elements.
  2. The results suggest that this vacuolar GRP could be involved in organ growth by promoting cell elongation processes.
    Title: AtGRP5, a vacuole-located glycine-rich protein involved in cell elongation.
  3. results suggest the possible role of some species of glycine-rich proteins, such as AtGRP5 and AtGRP23, in response to the pathogenic invasion mediated by cutin monomers in plants
    Title: Expression of glycine-rich protein genes, AtGRP5 and AtGRP23, induced by the cutin monomer 16-hydroxypalmitic acid in Arabidopsis thaliana.
Submit: New GeneRIF Correction

General gene information

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NM_112938.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables structural constituent of cell wall TAS
Traceable Author Statement
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of cell growth IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in positive regulation of organ growth IMP
Inferred from Mutant Phenotype
more info
 PubMed 
acts_upstream_of_or_within response to abscisic acid IEP
Inferred from Expression Pattern
more info
 PubMed 
involved_in response to abscisic acid IEP
Inferred from Expression Pattern
more info
 PubMed 
involved_in response to flooding IEP
Inferred from Expression Pattern
more info
 PubMed 
acts_upstream_of_or_within response to salicylic acid IEP
Inferred from Expression Pattern
more info
 PubMed 
Component Evidence Code Pubs
located_in plant-type cell wall TAS
Traceable Author Statement
more info
 PubMed 
located_in plant-type vacuole IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
glycine-rich protein 5
NP_188682.1
  • glycine-rich protein 5 (GRP5); Has 299218 Blast hits to 51775 proteins in 2622 species: Archae - 740; Bacteria - 86710; Metazoa - 106696; Fungi - 19777; Plants - 26257; Viruses - 3929; Other Eukaryotes - 55109 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    7140294..7141353 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_112938.4 → NP_188682.1  glycine-rich protein 5 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_188682.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q41191, Q9LTP5
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9LTP5.1

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