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tRNA:Ser-GCT-2-1 transfer RNA:Serine-GCT 2-1 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 3771926, updated on 9-Dec-2024

Summary

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Official Symbol
tRNA:Ser-GCT-2-1provided by FlyBase
Official Full Name
transfer RNA:Serine-GCT 2-1provided by FlyBase
Primary source
FLYBASE:FBgn0011970
Locus tag
Dmel_CR31396
See related
AllianceGenome:FB:FBgn0011970
Gene type
tRNA
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
AE002708.trna56-SerGCT; AGC; chr3R.trna62-SerGCT; CR31396; Dmel\CR31396; tRNA-Ser-GCT-2-1; tRNA:S; tRNA:S2b; tRNA:S2b:86A; tRNA:S:GCT:AE002708-f; tRNA:ser; tRNA:ser2b; tRNA:ser2b:86A; tRNA[Ser][[2b]]; tRNA[[Ser]]
Summary
Predicted to enable AGC codon-amino acid adaptor activity. Predicted to be involved in translation. Predicted to be located in cytosol. [provided by Alliance of Genome Resources, Dec 2024]
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Genomic context

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See tRNA:Ser-GCT-2-1 in Genome Data Viewer
Location:
86A5-86A5; 3-49 cM
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (10278054..10278135, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (6103776..6103857, complement)

Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene Sirtuin 6 Neighboring gene pontin Neighboring gene Nuak family kinase Neighboring gene uncharacterized protein Neighboring gene BIR repeat containing ubiquitin-conjugating enzyme

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. An analysis of five serine transfer ribonucleic acids from Drosophila. White BN, et al. J Biol Chem, 1975 Jan 25. PMID 803967
  2. Localization of tRNA genes of Drosophila melanogaster by in situ hybridization. Hayashi S, et al. Chromosoma, 1982. PMID 6814868
  3. Conservatism of sites of tRNA loci among the linkage groups of several Drosophila species. Tonzetich J, et al. J Mol Evol, 1990 Feb. PMID 2107332
  4. tRNA Fragments Populations Analysis in Mutants Affecting tRNAs Processing and tRNA Methylation. Molla-Herman A, et al. Front Genet, 2020. PMID 33193603, Free PMC Article
  5. Integrated tRNA, transcript, and protein profiles in response to steroid hormone signaling. Van Bortle K, et al. RNA, 2015 Oct. PMID 26289344, Free PMC Article

See all (8) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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  • alternate names: transfer RNA:ser; transfer RNA:ser2b; transfer RNA:ser2b:86A
  • tRNA:Ser-GCT-2-1-RA; Dmel\tRNA:Ser-GCT-2-1-RA; CR31396-RA; Dmel\CR31396-RA

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables AGC codon-amino acid adaptor activity ISM
Inferred from Sequence Model
more info
 PubMed 
enables triplet codon-amino acid adaptor activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in translation IC
Inferred by Curator
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IC
Inferred by Curator
more info
 PubMed 
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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