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lncRNA:CR33938 long non-coding RNA:CR33938 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 3772088, updated on 11-Sep-2024

Summary

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Official Symbol
lncRNA:CR33938provided by FlyBase
Official Full Name
long non-coding RNA:CR33938provided by FlyBase
Primary source
FLYBASE:FBgn0063127
Locus tag
Dmel_CR33938
See related
AllianceGenome:FB:FBgn0063127
Gene type
ncRNA
RNA name
lncRNA
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
BcDNA:LP03188; CR33938; Dmel\CR33938; pncr002:3R
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Genomic context

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See lncRNA:CR33938 in Genome Data Viewer
Location:
84A4-84A4; 3-48 cM
Exon count:
2
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (6699560..6700164, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (2525282..2525886, complement)

Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene Ccp84Ad Neighboring gene Ccp84Ac Neighboring gene Ccp84Ab Neighboring gene Ccp84Aa

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Single-Cell Atlas of the Drosophila Leg Disc Identifies a Long Non-Coding RNA in Late Development. Tse J, et al. Int J Mol Sci, 2022 Jun 18. PMID 35743238, Free PMC Article
  2. Opposing intrinsic temporal gradients guide neural stem cell production of varied neuronal fates. Liu Z, et al. Science, 2015 Oct 16. PMID 26472907
  3. Identification of putative noncoding polyadenylated transcripts in Drosophila melanogaster. Tupy JL, et al. Proc Natl Acad Sci U S A, 2005 Apr 12. PMID 15809421, Free PMC Article
  4. Conservation of regulatory sequences and gene expression patterns in the disintegrating Drosophila Hox gene complex. Negre B, et al. Genome Res, 2005 May. PMID 15867430, Free PMC Article
  5. Genome-Wide Identification of Long Noncoding RNA and Their Potential Interactors in ISWI Mutants. Zhang L, et al. Int J Mol Sci, 2022 Jun 2. PMID 35682924, Free PMC Article

See all (16) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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  • alternate names: putative noncoding RNA 002:3R
  • lncRNA:CR33938-RA; Dmel\lncRNA:CR33938-RA; CR33938-RA; Dmel\CR33938-RA

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033777.3 Reference assembly

    Range
    6699560..6700164 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. NR_002492.2 RNA Sequence

    Status: REVIEWED

Nucleotide Protein
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Gene LinkOut

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