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tRNA:His-GTG-1-2 transfer RNA:Histidine-GTG 1-2 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 3772151, updated on 9-Dec-2024

Summary

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Official Symbol
tRNA:His-GTG-1-2provided by FlyBase
Official Full Name
transfer RNA:Histidine-GTG 1-2provided by FlyBase
Primary source
FLYBASE:FBgn0050250
Locus tag
Dmel_CR30250
See related
AllianceGenome:FB:FBgn0050250
Gene type
tRNA
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
AE002787.trna20-HisGTG; CAC; chr2R.trna79-HisGTG; CR30250; Dmel\CR30250; tRNA-His-GTG-1-2; tRNA:CR30250; tRNA:H:GTG:AE002787-c; tRNA[His]
Summary
Predicted to enable CAC codon-amino acid adaptor activity. Predicted to be involved in translation. Predicted to be located in cytosol. [provided by Alliance of Genome Resources, Dec 2024]
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Genomic context

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See tRNA:His-GTG-1-2 in Genome Data Viewer
Location:
48F10-48F10; 2-66 cM
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (12334234..12334305, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (8221739..8221810, complement)

Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene gartenzwerg Neighboring gene transfer RNA:Histidine-GTG 1-1 Neighboring gene transfer RNA:Histidine-GTG 1-3 Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Synthetic inhibitors of the processing of pretransfer RNA by the ribonuclease P ribozyme: enzyme inhibitors which act by binding to substrate. Hori Y, et al. Biochemistry, 2001 Jan 23. PMID 11170376
  2. A nutrient-driven tRNA modification alters translational fidelity and genome-wide protein coding across an animal genus. Zaborske JM, et al. PLoS Biol, 2014 Dec. PMID 25489848, Free PMC Article
  3. In vitro hyperprocessing of Drosophila tRNAs by the catalytic RNA of RNase P the cloverleaf structure of tRNA is not always stable? Hori Y, et al. Eur J Biochem, 2000 Aug. PMID 10903512
  4. Integrated tRNA, transcript, and protein profiles in response to steroid hormone signaling. Van Bortle K, et al. RNA, 2015 Oct. PMID 26289344, Free PMC Article
  5. GtRNAdb 2.0: an expanded database of transfer RNA genes identified in complete and draft genomes. Chan PP, et al. Nucleic Acids Res, 2016 Jan 4. PMID 26673694, Free PMC Article

See all (7) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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  • alternate names: transfer RNA:CR30250
  • tRNA:His-GTG-1-2-RA; Dmel\tRNA:His-GTG-1-2-RA; CR30250-RA; Dmel\CR30250-RA

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables CAC codon-amino acid adaptor activity ISM
Inferred from Sequence Model
more info
 PubMed 
enables triplet codon-amino acid adaptor activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in translation IC
Inferred by Curator
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IC
Inferred by Curator
more info
 PubMed 

Gene LinkOut

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