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tRNA:Pro-CGG-2-1 transfer RNA:Proline-CGG 2-1 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 3772384, updated on 9-Dec-2024

Summary

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Official Symbol
tRNA:Pro-CGG-2-1provided by FlyBase
Official Full Name
transfer RNA:Proline-CGG 2-1provided by FlyBase
Primary source
FLYBASE:FBgn0052546
Locus tag
Dmel_CR32546
See related
AllianceGenome:FB:FBgn0052546
Gene type
tRNA
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
AE002593.trna10-ProCGG; CCG; chrX.trna14-ProCGG; CR32546; Dmel\CR32546; tRNA-Pro-CGG-2-1; tRNA:CR32546; tRNA:P:CGG:AE002593
Summary
Predicted to enable CCG codon-amino acid adaptor activity. Predicted to be involved in translation. Predicted to be located in cytosol. [provided by Alliance of Genome Resources, Dec 2024]
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Genomic context

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See tRNA:Pro-CGG-2-1 in Genome Data Viewer
Location:
17C4-17C4; 1-60 cM
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (18565764..18565835)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (18459797..18459868)

Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene Beadex Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene long non-coding RNA:CR43492 Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. tRNA Fragments Populations Analysis in Mutants Affecting tRNAs Processing and tRNA Methylation. Molla-Herman A, et al. Front Genet, 2020. PMID 33193603, Free PMC Article
  2. Integrated tRNA, transcript, and protein profiles in response to steroid hormone signaling. Van Bortle K, et al. RNA, 2015 Oct. PMID 26289344, Free PMC Article
  3. GtRNAdb 2.0: an expanded database of transfer RNA genes identified in complete and draft genomes. Chan PP, et al. Nucleic Acids Res, 2016 Jan 4. PMID 26673694, Free PMC Article
  4. Systematic identification of tRNA genes in Drosophila melanogaster. Marygold SJ, et al. MicroPubl Biol, 2022. PMID 35789696, Free PMC Article
  5. Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species. Sanfilippo P, et al. Genome Biol, 2017 Nov 30. PMID 29191225, Free PMC Article

See all (6) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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  • alternate names: transfer RNA:CR32546
  • tRNA:Pro-CGG-2-1-RA; Dmel\tRNA:Pro-CGG-2-1-RA; CR32546-RA; Dmel\CR32546-RA

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables CCG codon-amino acid adaptor activity ISM
Inferred from Sequence Model
more info
 PubMed 
enables triplet codon-amino acid adaptor activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in translation IC
Inferred by Curator
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IC
Inferred by Curator
more info
 PubMed 

Gene LinkOut

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