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lncRNA:CR32661 long non-coding RNA:CR32661 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 3772605, updated on 11-Sep-2024

Summary

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Official Symbol
lncRNA:CR32661provided by FlyBase
Official Full Name
long non-coding RNA:CR32661provided by FlyBase
Primary source
FLYBASE:FBgn0030356
Locus tag
Dmel_CR32661
See related
AllianceGenome:FB:FBgn0030356
Gene type
ncRNA
RNA name
lncRNA
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
bs05a04.y1; bs07b04.y1; bs26d09.y1; CG18184; CR32661; Dmel\CR32661
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Genomic context

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See lncRNA:CR32661 in Genome Data Viewer
Location:
10F6-10F6; 1-37 cM
Exon count:
4
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (11917806..11918678, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (11811839..11812711, complement)

Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene papillote Neighboring gene long non-coding RNA:CR43157 Neighboring gene long non-coding RNA:CR32660 Neighboring gene sclp

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Widespread generation of alternative UTRs contributes to sex-specific RNA binding by UNR. Mihailovic M, et al. RNA, 2012 Jan. PMID 22101243, Free PMC Article
  2. Gene discovery using computational and microarray analysis of transcription in the Drosophila melanogaster testis. Andrews J, et al. Genome Res, 2000 Dec. PMID 11116097, Free PMC Article
  3. Critical roles of long noncoding RNAs in Drosophila spermatogenesis. Wen K, et al. Genome Res, 2016 Sep. PMID 27516619, Free PMC Article
  4. High-fidelity promoter profiling reveals widespread alternative promoter usage and transposon-driven developmental gene expression. Batut P, et al. Genome Res, 2013 Jan. PMID 22936248, Free PMC Article
  5. Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster. Liu X, et al. RNA, 2017 Dec. PMID 28851752, Free PMC Article

See all (6) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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  • lncRNA:CR32661-RA; Dmel\lncRNA:CR32661-RA; CR32661-RA; Dmel\CR32661-RA

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_004354.4 Reference assembly

    Range
    11917806..11918678 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. NR_002106.1 RNA Sequence

    Status: REVIEWED

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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