U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

tRNA:Thr-AGT-1-1 transfer RNA:Threonine-AGT 1-1 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 3772669, updated on 9-Dec-2024

Summary

Go to the top of the page Help
Official Symbol
tRNA:Thr-AGT-1-1provided by FlyBase
Official Full Name
transfer RNA:Threonine-AGT 1-1provided by FlyBase
Primary source
FLYBASE:FBgn0051885
Locus tag
Dmel_CR31885
See related
AllianceGenome:FB:FBgn0051885
Gene type
tRNA
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
ACU; AE002690.trna20-ThrAGT; chr2L.trna29-ThrAGT; CR31885; Dmel\CR31885; tRNA-Thr-AGT-1-1; tRNA:CR31885; tRNA:T:AGT:AE002690; tRNA[[Thr]]
Summary
Predicted to enable ACU codon-amino acid adaptor activity. Predicted to be involved in translation. Predicted to be located in cytosol. [provided by Alliance of Genome Resources, Dec 2024]
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See tRNA:Thr-AGT-1-1 in Genome Data Viewer
Location:
30A6-30A6; 2-35 cM
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (9236521..9236594, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (9236521..9236594, complement)

Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene taiman Neighboring gene pseudo Neighboring gene australin

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. tRNA Fragments Populations Analysis in Mutants Affecting tRNAs Processing and tRNA Methylation. Molla-Herman A, et al. Front Genet, 2020. PMID 33193603, Free PMC Article
  2. Integrated tRNA, transcript, and protein profiles in response to steroid hormone signaling. Van Bortle K, et al. RNA, 2015 Oct. PMID 26289344, Free PMC Article
  3. GtRNAdb 2.0: an expanded database of transfer RNA genes identified in complete and draft genomes. Chan PP, et al. Nucleic Acids Res, 2016 Jan 4. PMID 26673694, Free PMC Article
  4. Systematic identification of tRNA genes in Drosophila melanogaster. Marygold SJ, et al. MicroPubl Biol, 2022. PMID 35789696, Free PMC Article
  5. The many landscapes of recombination in Drosophila melanogaster. Comeron JM, et al. PLoS Genet, 2012. PMID 23071443, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help
  • alternate names: transfer RNA:CR31885
  • tRNA:Thr-AGT-1-1-RA; Dmel\tRNA:Thr-AGT-1-1-RA; CR31885-RA; Dmel\CR31885-RA

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables ACU codon-amino acid adaptor activity ISM
Inferred from Sequence Model
more info
 PubMed 
enables triplet codon-amino acid adaptor activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in translation IC
Inferred by Curator
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IC
Inferred by Curator
more info
 PubMed 

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.