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tRNA:Ser-GCT-2-2 transfer RNA:Serine-GCT 2-2 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 3772707, updated on 9-Dec-2024

Summary

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Official Symbol
tRNA:Ser-GCT-2-2provided by FlyBase
Official Full Name
transfer RNA:Serine-GCT 2-2provided by FlyBase
Primary source
FLYBASE:FBgn0011971
Locus tag
Dmel_CR31476
See related
AllianceGenome:FB:FBgn0011971
Gene type
tRNA
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
AE002708.trna53-SerGCT; AGC; chr3R.trna59-SerGCT; CR31476; Dmel\CR31476; tRNA-Ser-GCT-2-2; tRNA:S; tRNA:S2b; tRNA:S2b:88A; tRNA:S:GCT:AE002708-e; tRNA:ser; tRNA:ser2b; tRNA:ser2b:88A; tRNA[Ser][[2b]]; tRNA[[Ser]]
Summary
Predicted to enable AGC codon-amino acid adaptor activity. Predicted to be involved in translation. Predicted to be located in cytosol. [provided by Alliance of Genome Resources, Dec 2024]
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Genomic context

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See tRNA:Ser-GCT-2-2 in Genome Data Viewer
Location:
88A4-88A4; 3-54 cM
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (14044525..14044606, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (9870247..9870328, complement)

Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene roadkill Neighboring gene Cytochrome P450 6d5 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene forkhead box, sub-group O Neighboring gene Niemann-Pick type C-2b

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Localization of tRNA genes of Drosophila melanogaster by in situ hybridization. Hayashi S, et al. Chromosoma, 1982. PMID 6814868
  2. Many P-element insertions affect wing shape in Drosophila melanogaster. Weber K, et al. Genetics, 2005 Mar. PMID 15545659, Free PMC Article
  3. Conservatism of sites of tRNA loci among the linkage groups of several Drosophila species. Tonzetich J, et al. J Mol Evol, 1990 Feb. PMID 2107332
  4. (Differentially) Expressed tRNA-Derived Small RNAs Co-Sediment Primarily with Non-Polysomal Fractions in Drosophila. Göktaş Ç, et al. Genes (Basel), 2017 Nov 20. PMID 29156628, Free PMC Article
  5. Integrated tRNA, transcript, and protein profiles in response to steroid hormone signaling. Van Bortle K, et al. RNA, 2015 Oct. PMID 26289344, Free PMC Article

See all (8) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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  • alternate names: transfer RNA:ser; transfer RNA:ser2b:88A; transfer RNA:ser2b
  • tRNA:Ser-GCT-2-2-RA; Dmel\tRNA:Ser-GCT-2-2-RA; CR31476-RA; Dmel\CR31476-RA

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables AGC codon-amino acid adaptor activity ISM
Inferred from Sequence Model
more info
 PubMed 
enables triplet codon-amino acid adaptor activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in translation IC
Inferred by Curator
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IC
Inferred by Curator
more info
 PubMed 
Nucleotide Protein
Heading Accession and Version

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