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Reg-2 Rhythmically expressed gene 2 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 38075, updated on 4-Jan-2025

Summary

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Official Symbol
Reg-2provided by FlyBase
Official Full Name
Rhythmically expressed gene 2provided by FlyBase
Primary source
FLYBASE:FBgn0016715
Locus tag
Dmel_CG3200
See related
AllianceGenome:FB:FBgn0016715
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
21483246; CG3200; Dmel\CG3200; Dreg-2
Summary
Predicted to be located in mitochondrion and nucleolus. Predicted to be active in nucleus. Is expressed in several structures, including adult head; adult heart; dorsal pharyngeal muscle primordium; larval muscle cell; and visceral trunk mesoderm derivative. Orthologous to human HDHD3 (haloacid dehalogenase like hydrolase domain containing 3). [provided by Alliance of Genome Resources, Jan 2025]
Orthologs
all
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Genomic context

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See Reg-2 in Genome Data Viewer
Location:
61C7-61C7; 3-0.5 cM
Exon count:
3
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (605165..606569, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (605165..606569, complement)

Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene Mediator complex subunit 14 Neighboring gene antisense RNA:CR45807 Neighboring gene uncharacterized protein Neighboring gene long non-coding RNA:CR44513 Neighboring gene long non-coding RNA:CR42719

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Extent and character of circadian gene expression in Drosophila melanogaster: identification of twenty oscillating mRNAs in the fly head. Van Gelder RN, et al. Curr Biol, 1995 Dec 1. PMID 8749395
  2. Dynamic de novo adipose tissue development during metamorphosis in Drosophila melanogaster. Tsuyama T, et al. Development, 2023 May 15. PMID 37092314
  3. Influence of the period-dependent circadian clock on diurnal, circadian, and aperiodic gene expression in Drosophila melanogaster. Lin Y, et al. Proc Natl Acad Sci U S A, 2002 Jul 9. PMID 12089325, Free PMC Article
  4. The bantam gene regulates Drosophila growth. Hipfner DR, et al. Genetics, 2002 Aug. PMID 12196398, Free PMC Article
  5. A new genetic locus controlling growth and proliferation in Drosophila melanogaster. Raisin S, et al. Genetics, 2003 Jul. PMID 12871911, Free PMC Article

See all (40) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by FlyBase

Component Evidence Code Pubs
located_in mitochondrion ISS
Inferred from Sequence or Structural Similarity
more info
  
located_in nucleolus ISS
Inferred from Sequence or Structural Similarity
more info
  
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
rhythmically expressed gene 2
Names
CG3200-PA
Reg-2-PA
drosophila rhythmically expressed gene 2

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_037436.4 Reference assembly

    Range
    605165..606569 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_138199.3 → NP_612043.1  rhythmically expressed gene 2 [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_612043.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q94915, Q9W0P6
    UniProtKB/TrEMBL
    Q8MR71
    Related
    FBpp0072460
    Conserved Domains (2) summary
    TIGR02252
    Location:8 → 220
    DREG-2; REG-2-like, HAD superfamily (subfamily IA) hydrolase
    cl21460
    Location:76 → 215
    HAD_like; Haloacid Dehalogenase-like Hydrolases
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q8MR71 Q8MR71
Q94915.1 Q94915

Gene LinkOut

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Chemical Information
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