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insB9 IS1 family transposase B [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 38094937, updated on 19-Sep-2024

Summary

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Official Symbol
insB9
Official Full Name
IS1 family transposase B
Primary source
ECOCYC:G0-16637
Locus tag
b4710
See related
ASAP:ABE-0285313
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK4567
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Genomic context

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Sequence:
NC_000913.3 (257923..258426, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene xanthine-guanine phsophoribosyltransferase Neighboring gene fermentation-respiration switch protein Neighboring gene pseudo Neighboring gene IS1 family repressor TnpA Neighboring gene outer membrane porin PhoE Neighboring gene glutamate 5-kinase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article
  2. The complete genome sequence of Escherichia coli K-12. Blattner FR, et al. Science, 1997 Sep 5. PMID 9278503
  3. Escherichia coli K-12: a cooperatively developed annotation snapshot--2005. Riley M, et al. Nucleic Acids Res, 2006. PMID 16397293, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
  
enables transposase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in DNA recombination IEA
Inferred from Electronic Annotation
more info
  
involved_in DNA transposition IEA
Inferred from Electronic Annotation
more info
  
involved_in transposition IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
IS1 family transposase B

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    257923..258426 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_009518739.1 IS1 family transposase B [Escherichia coli str. K-12 substr. MG1655]

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    P0CF31
    UniProtKB/TrEMBL
    A0A0A8J546, A0A2H4TP98
    Conserved Domains (1) summary
    cl00721
    Location:37 → 167
    DDE_Tnp_IS1; IS1 transposase
Nucleotide Protein
Heading Accession and Version

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