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insA9 IS1 family repressor TnpA [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 38094938, updated on 17-Dec-2024

Summary

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Official Symbol
insA9
Official Full Name
IS1 family repressor TnpA
Primary source
ECOCYC:G0-16638
Locus tag
b4709
See related
ASAP:ABE-0285314
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK4566
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Genomic context

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Sequence:
NC_000913.3 (258345..258620, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene xanthine-guanine phsophoribosyltransferase Neighboring gene fermentation-respiration switch protein Neighboring gene IS1 family transposase B Neighboring gene pseudo Neighboring gene outer membrane porin PhoE Neighboring gene glutamate 5-kinase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article
  2. The complete genome sequence of Escherichia coli K-12. Blattner FR, et al. Science, 1997 Sep 5. PMID 9278503
  3. Escherichia coli K-12: a cooperatively developed annotation snapshot--2005. Riley M, et al. Nucleic Acids Res, 2006. PMID 16397293, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by EcoCyc

Process Evidence Code Pubs
involved_in DNA recombination IEA
Inferred from Electronic Annotation
more info
  
involved_in DNA transposition IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in DNA transposition IEA
Inferred from Electronic Annotation
more info
  
involved_in transposition IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
IS1 family repressor TnpA

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    258345..258620 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_009518740.1 IS1 family repressor TnpA [Escherichia coli str. K-12 substr. MG1655]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A170TVE0, A0A377C0U4, A0A3S4K392, A0A509DNY3, A0AAE9U4P9, A0AAV1IQ97, A0AAX2JML7, A7ZGQ4, C3UUR6, D7GKB4, Q6KD64, Q849W1
    Conserved Domains (1) summary
    NF033558
    Location:8 → 91
    transpos_IS1; IS1 family transposase
Nucleotide Protein
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Gene LinkOut

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