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Gm5154 predicted gene 5154 [ Mus musculus (house mouse) ]

Gene ID: 381818, updated on 17-Aug-2024

Summary

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Official Symbol
Gm5154provided by MGI
Official Full Name
predicted gene 5154provided by MGI
Primary source
MGI:MGI:3646668
See related
AllianceGenome:MGI:3646668
Gene type
protein coding
RefSeq status
MODEL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
EG381818
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Genomic context

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See Gm5154 in Genome Data Viewer
Location:
6 G1; 6 64.03 cM
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 6 NC_000072.7 (132415494..132418687, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 6 NC_000072.6 (132438531..132441724, complement)

Chromosome 6 - NC_000072.7Genomic Context describing neighboring genes Neighboring gene DnaJ (Hsp40) homolog, subfamily A, member 1 pseudogene Neighboring gene proline-rich protein BstNI subfamily 1C Neighboring gene cyclin-dependent kinase 4 pseudogene Neighboring gene STARR-seq mESC enhancer starr_17506 Neighboring gene STARR-seq mESC enhancer starr_17507 Neighboring gene STARR-seq mESC enhancer starr_17508 Neighboring gene predicted gene, 18326 Neighboring gene STARR-seq mESC enhancer starr_17509 Neighboring gene STARR-seq mESC enhancer starr_17510 Neighboring gene STARR-seq mESC enhancer starr_17511 Neighboring gene proline rich protein HaeIII subfamily 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Clone Names

  • MGC78233

General protein information

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Preferred Names
proline-rich proteoglycan 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000072.7 Reference GRCm39 C57BL/6J

    Range
    132415494..132418687 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_055019524.1 → XP_054875499.1  proline-rich proteoglycan 2 isoform X2

  2. XM_055019525.1 → XP_054875500.1  proline-rich proteoglycan 2 isoform X3

  3. XM_055019523.1 → XP_054875498.1  proline-rich proteoglycan 2 isoform X1

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001004160.1: Suppressed sequence

    Description
    NM_001004160.1: This RefSeq was permanently suppressed because currently there is insufficient support for the transcript and the protein.
Nucleotide Protein Strain
Heading Accession and Version

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