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B230311B06Rik RIKEN cDNA B230311B06 gene [ Mus musculus (house mouse) ]

Gene ID: 381914, updated on 22-Oct-2024

Summary

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Official Symbol
B230311B06Rikprovided by MGI
Official Full Name
RIKEN cDNA B230311B06 geneprovided by MGI
Primary source
MGI:MGI:2686541
See related
Ensembl:ENSMUSG00000109284 AllianceGenome:MGI:2686541
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Gm1695
Expression
Low expression observed in reference dataset See more
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Genomic context

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See B230311B06Rik in Genome Data Viewer
Location:
7; 7 F1
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 7 NC_000073.7 (118191508..118196061)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 7 NC_000073.6 (118592285..118596838)

Chromosome 7 - NC_000073.7Genomic Context describing neighboring genes Neighboring gene demethyl-Q 7 Neighboring gene STARR-positive B cell enhancer ABC_E1093 Neighboring gene transmembrane channel-like gene family 7 Neighboring gene transmembrane channel-like gene family 5 Neighboring gene STARR-positive B cell enhancer mm9_chr7:125849164-125849465 Neighboring gene glycerophosphodiester phosphodiesterase 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. Normalization and subtraction: two approaches to facilitate gene discovery. Bonaldo MF, et al. Genome Res, 1996 Sep. PMID 8889548
  2. A high-resolution anatomical atlas of the transcriptome in the mouse embryo. Diez-Roux G, et al. PLoS Biol, 2011 Jan 18. PMID 21267068, Free PMC Article
  3. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
  4. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636
  5. RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer. Shibata K, et al. Genome Res, 2000 Nov. PMID 11076861, Free PMC Article

See all (9) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_169120.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC124444
    Related
    ENSMUST00000209113.4

  2. NR_169121.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC124444
    Related
    ENSMUST00000208859.4

  3. NR_169122.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC124444
    Related
    ENSMUST00000340879.1

  4. NR_169123.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC124444
    Related
    ENSMUST00000340884.1

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000073.7 Reference GRCm39 C57BL/6J

    Range
    118191508..118196061
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001331201.1: Suppressed sequence

    Description
    NM_001331201.1: This RefSeq was removed because it is now thought that this gene does not encode a protein.

  2. NM_001331202.1: Suppressed sequence

    Description
    NM_001331202.1: This RefSeq was removed because it is now thought that this gene does not encode a protein.

  3. NM_001331203.1: Suppressed sequence

    Description
    NM_001331203.1: This RefSeq was removed because it is now thought that this gene does not encode a protein.

  4. NM_001331204.1: Suppressed sequence

    Description
    NM_001331204.1: This RefSeq was removed because it is now thought that this gene does not encode a protein.
Nucleotide Protein Strain
Heading Accession and Version

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