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GV1 GV1 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 38238, updated on 9-Dec-2024

Summary

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Official Symbol
GV1provided by FlyBase
Official Full Name
GV1provided by FlyBase
Primary source
FLYBASE:FBgn0027790
Locus tag
Dmel_CG12023
See related
AllianceGenome:FB:FBgn0027790
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
BcDNA:RH49123; CG12023; DIP1; Dmel\CG12023
Summary
Enables DNA binding activity. Located in nucleus. Colocalizes with nuclear membrane. Is expressed in organism. [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
all
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Genomic context

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See GV1 in Genome Data Viewer
Location:
62B4-62B6; 3-1.0 cM
Exon count:
5
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (1810588..1822903)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (1810588..1822903)

Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene antisense RNA:CR45686 Neighboring gene long non-coding RNA:CR45687 Neighboring gene Cuticular protein 62Ba Neighboring gene Cuticular protein 62Bb

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Identification of a new gene encoding pericentromeric dodeca-satellite binding protein in Drosophila melanogaster. De Felice B, et al. FEBS Lett, 1999 Jul 16. PMID 10428466
  2. Characterization of DIP1, a novel nuclear protein in Drosophila melanogaster. De Felice B, et al. Biochem Biophys Res Commun, 2003 Jul 25. PMID 12859943
  3. Accentuate the negative: proteome comparisons using the negative proteome database. Reiter LT, et al. Fly (Austin), 2007 May-Jun. PMID 18820470
  4. Polyglutamine Atrophin provokes neurodegeneration in Drosophila by repressing fat. Napoletano F, et al. EMBO J, 2011 Mar 2. PMID 21278706, Free PMC Article
  5. Somatic, germline and sex hierarchy regulated gene expression during Drosophila metamorphosis. Lebo MS, et al. BMC Genomics, 2009 Feb 13. PMID 19216785, Free PMC Article

See all (29) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables DNA binding IDA
Inferred from Direct Assay
more info
 PubMed 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
colocalizes_with nuclear membrane IDA
Inferred from Direct Assay
more info
 PubMed 
located_in nucleus IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
GV1
Names
CG12023-PA
CG12023-PB
GV1-PA
GV1-PB

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_037436.4 Reference assembly

    Range
    1810588..1822903
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_139408.3 → NP_647665.2  GV1, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_647665.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9W080

  2. NM_167920.2 → NP_728678.1  GV1, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_728678.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q8SXW3
    Related
    FBpp0072668
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q8SXW3 Q8SXW3
Q9W080 Q9W080

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