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CG8960 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

Gene ID: 38280, updated on 9-Dec-2024

Summary

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Official Symbol
CG8960provided by FlyBase
Official Full Name
uncharacterized proteinprovided by FlyBase
Primary source
FLYBASE:FBgn0035315
Locus tag
Dmel_CG8960
See related
AllianceGenome:FB:FBgn0035315
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
Dmel\CG8960
Summary
Is expressed in several structures, including anterior endoderm; anterior endoderm anlage; dorsal ectoderm anlage; foregut anlage; and mesoderm. [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
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Genomic context

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See CG8960 in Genome Data Viewer
Location:
62D2-62D2; 3-2 cM
Exon count:
2
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (2197013..2198089)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (2197013..2198089)

Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene Outer segment 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genes encoding novel secreted and transmembrane proteins are temporally and spatially regulated during Drosophila melanogaster embryogenesis. Zúñiga A, et al. BMC Biol, 2009 Sep 22. PMID 19772636, Free PMC Article
  2. Polymorphism and Divergence of Novel Gene Expression Patterns in Drosophila melanogaster. Cridland JM, et al. Genetics, 2020 Sep. PMID 32737121, Free PMC Article
  3. Accelerated sequence divergence of conserved genomic elements in Drosophila melanogaster. Holloway AK, et al. Genome Res, 2008 Oct. PMID 18583644, Free PMC Article
  4. Developmental control of nuclear morphogenesis and anchoring by charleston, identified in a functional genomic screen of Drosophila cellularisation. Pilot F, et al. Development, 2006 Feb. PMID 16421189
  5. Drosophila anti-nematode and antibacterial immune regulators revealed by RNA-Seq. Castillo JC, et al. BMC Genomics, 2015 Jul 11. PMID 26162375, Free PMC Article

See all (25) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

General protein information

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Preferred Names
uncharacterized protein
Names
CG8960-PA
CG8960-PB

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_037436.4 Reference assembly

    Range
    2197013..2198089
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_139441.3 → NP_647698.1  uncharacterized protein Dmel_CG8960, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_647698.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9W042
    Related
    FBpp0072750

  2. NM_167937.2 → NP_728719.1  uncharacterized protein Dmel_CG8960, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_728719.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q8IRF6
    Related
    FBpp0072751
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q8IRF6 Q8IRF6
Q9W042 Q9W042

Gene LinkOut

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