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CG13806 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

Gene ID: 38292, updated on 9-Dec-2024

Summary

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Official Symbol
CG13806provided by FlyBase
Official Full Name
uncharacterized proteinprovided by FlyBase
Primary source
FLYBASE:FBgn0035325
Locus tag
Dmel_CG13806
See related
AllianceGenome:FB:FBgn0035325
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
Dmel\CG13806
Summary
Predicted to enable chitin binding activity. Predicted to be located in extracellular region. Is expressed in embryonic Malpighian tubule; embryonic proventriculus; and embryonic proventriculus inner layer. [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
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Genomic context

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See CG13806 in Genome Data Viewer
Location:
62D4-62D4; 3-2 cM
Exon count:
2
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (2266394..2267640)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (2266394..2267640)

Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene Elongator complex protein 5 Neighboring gene peptide O-xylosyltransferase Neighboring gene uncharacterized protein Neighboring gene ecdysoneless Neighboring gene antisense RNA:CR45829 Neighboring gene obstructor-I Neighboring gene uncharacterized protein Neighboring gene yellow-g

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. An embryonic system to assess direct and indirect Wnt transcriptional targets. Suresh J, et al. Sci Rep, 2017 Sep 11. PMID 28894169, Free PMC Article
  2. Cell-autonomous roles of the ecdysoneless gene in Drosophila development and oogenesis. Gaziova I, et al. Development, 2004 Jun. PMID 15128659
  3. Intellectual disability-associated dBRWD3 regulates gene expression through inhibition of HIRA/YEM-mediated chromatin deposition of histone H3.3. Chen WY, et al. EMBO Rep, 2015 Apr. PMID 25666827, Free PMC Article
  4. Activating transcription factor 3 regulates immune and metabolic homeostasis. Rynes J, et al. Mol Cell Biol, 2012 Oct. PMID 22851689, Free PMC Article
  5. A Drosophila protein-interaction map centered on cell-cycle regulators. Stanyon CA, et al. Genome Biol, 2004. PMID 15575970, Free PMC Article

See all (27) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables chitin binding IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
uncharacterized protein
Names
CG13806-PA

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_037436.4 Reference assembly

    Range
    2266394..2267640
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_139451.2 → NP_647708.1  uncharacterized protein Dmel_CG13806 [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_647708.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q8SXL5, Q9W031
    Related
    FBpp0072758
    Conserved Domains (2) summary
    smart00494
    Location:247 → 293
    ChtBD2; Chitin-binding domain type 2
    pfam01607
    Location:105 → 158
    CBM_14; Chitin binding Peritrophin-A domain
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q8SXL5 Q8SXL5

Gene LinkOut

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