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Vmn1r55 vomeronasal 1 receptor 55 [ Mus musculus (house mouse) ]

Gene ID: 384522, updated on 27-Nov-2024

Summary

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Official Symbol
Vmn1r55provided by MGI
Official Full Name
vomeronasal 1 receptor 55provided by MGI
Primary source
MGI:MGI:3033474
See related
Ensembl:ENSMUSG00000118215 AllianceGenome:MGI:3033474
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Gm403; V1rd5; Gm1422
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Genomic context

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See Vmn1r55 in Genome Data Viewer
Location:
7 A1; 7 2.98 cM
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 7 NC_000073.7 (5149489..5150421, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 7 NC_000073.6 (5146490..5147422, complement)

Chromosome 7 - NC_000073.7Genomic Context describing neighboring genes Neighboring gene RAS-like, family 2, locus 9 Neighboring gene predicted gene, 47692 Neighboring gene vomeronasal 1 receptor 56 Neighboring gene vomeronasal 1 receptor 57

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A novel family of candidate pheromone receptors in mammals. Pantages E, et al. Neuron, 2000 Dec. PMID 11163270
  2. Multiple new and isolated families within the mouse superfamily of V1r vomeronasal receptors. Rodriguez I, et al. Nat Neurosci, 2002 Feb. PMID 11802169
  3. Manual annotation and analysis of the defensin gene cluster in the C57BL/6J mouse reference genome. Amid C, et al. BMC Genomics, 2009 Dec 15. PMID 20003482, Free PMC Article
  4. Extreme variability among mammalian V1R gene families. Young JM, et al. Genome Res, 2010 Jan. PMID 19952141, Free PMC Article
  5. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
vomeronasal 1 receptor 55
Names
vomernasal 1 receptor Vmn1r55
vomeronasal 1 receptor, D5

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001166706.1 → NP_001160178.1  vomeronasal 1 receptor 55

    Status: PROVISIONAL

    Source sequence(s)
    AC162893
    Consensus CDS
    CCDS51983.1
    UniProtKB/TrEMBL
    E9Q8I6
    Related
    ENSMUSP00000096443.4, ENSMUST00000098844.5
    Conserved Domains (1) summary
    pfam03402
    Location:32 → 281
    V1R; Vomeronasal organ pheromone receptor family, V1R

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000073.7 Reference GRCm39 C57BL/6J

    Range
    5149489..5150421 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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