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Ssxb7 SSX member B7 [ Mus musculus (house mouse) ]

Gene ID: 387284, updated on 17-Aug-2024

Summary

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Official Symbol
Ssxb7provided by MGI
Official Full Name
SSX member B7provided by MGI
Primary source
MGI:MGI:2446776
See related
Ensembl:ENSMUSG00000081410 AllianceGenome:MGI:2446776
Gene type
protein coding
RefSeq status
MODEL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Gm6797; EG627853
Expression
Low expression observed in reference dataset See more
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Genomic context

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See Ssxb7 in Genome Data Viewer
Location:
X A1.1
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) X NC_000086.8 (8505846..8511961)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) X NC_000086.7 (8639607..8645722)

Chromosome X - NC_000086.8Genomic Context describing neighboring genes Neighboring gene SSX member B6 Neighboring gene STARR-seq mESC enhancer starr_46697 Neighboring gene STARR-seq mESC enhancer starr_46698 Neighboring gene SSX member B3 Neighboring gene STARR-seq mESC enhancer starr_46699 Neighboring gene developmental pluripotency associated 5 pseudogene Neighboring gene cell division control protein 6 homolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. Identification and characterization of mouse SSX genes: a multigene family on the X chromosome with restricted cancer/testis expression. Chen YT, et al. Genomics, 2003 Dec. PMID 14611804

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
SSX member B7; protein SSX1
Names
predicted pseudogene 6797
synovial sarcoma, X member B, breakpoint 7
synovial sarcoma, X member B7

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000086.8 Reference GRCm39 C57BL/6J

    Range
    8505846..8511961
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017318681.1 → XP_017174170.1  protein SSX1

    UniProtKB/TrEMBL
    A2BI73
    Related
    ENSMUST00000119440.2
    Conserved Domains (2) summary
    pfam09514
    Location:142 → 165
    SSXRD; SSXRD motif
    cl02581
    Location:23 → 83
    KRAB_A-box; KRAB (Kruppel-associated box) domain -A box
Nucleotide Protein Strain
Heading Accession and Version

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