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LINC02764 long intergenic non-protein coding RNA 2764 [ Homo sapiens (human) ]

Gene ID: 387810, updated on 10-Dec-2024

Summary

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Official Symbol
LINC02764provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 2764provided by HGNC
Primary source
HGNC:HGNC:54283
See related
Ensembl:ENSG00000255484 AllianceGenome:HGNC:54283
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

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See LINC02764 in Genome Data Viewer
Location:
11q23.1
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 11 NC_000011.10 (112534220..112555802, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 11 NC_060935.1 (112544665..112566250, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 11 NC_000011.9 (112404943..112426525, complement)

Chromosome 11 - NC_000011.10Genomic Context describing neighboring genes Neighboring gene ReSE screen-validated silencer GRCh37_chr11:112332561-112332759 Neighboring gene uncharacterized LOC107984389 Neighboring gene ribosomal protein L23a pseudogene 62 Neighboring gene long intergenic non-protein coding RNA 2763 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 5534 Neighboring gene uncharacterized LOC124902757 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 5535 Neighboring gene H3K27ac hESC enhancer GRCh37_chr11:112541485-112541985 Neighboring gene uncharacterized LOC105369496 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_18813 Neighboring gene MPRA-validated peak1472 silencer

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Tissue-specific circular RNA induction during human fetal development
  • Description: 35 human fetal samples from 6 tissues (3 - 7 replicates per tissue) collected between 10 and 20 weeks gestational time were sequenced using Illumina TruSeq Stranded Total RNA
  • BioProject: PRJNA270632
  • Publication: PMID 26076956
  • Analysis date: Mon Apr 2 22:54:59 2018

Bibliography

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Related articles in PubMed

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See variants in ClinVar

See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_104155.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AP003063, BC070394
    Related
    ENST00000525984.2

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000011.10 Reference GRCh38.p14 Primary Assembly

    Range
    112534220..112555802 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060935.1 Alternate T2T-CHM13v2.0

    Range
    112544665..112566250 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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