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RhoGEF4 Rho guanine nucleotide exchange factor 4 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 38806, updated on 9-Dec-2024

Summary

Official Symbol
RhoGEF4provided by FlyBase
Official Full Name
Rho guanine nucleotide exchange factor 4provided by FlyBase
Primary source
FLYBASE:FBgn0035761
Locus tag
Dmel_CG8606
See related
AllianceGenome:FB:FBgn0035761
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CG8606; Dmel\CG8606; DRhoGEF4; RhoGEF
Summary
Enables guanyl-nucleotide exchange factor activity. Involved in cleavage furrow ingression; positive regulation of Rho protein signal transduction; and positive regulation of stress fiber assembly. Located in midbody; mitotic actomyosin contractile ring; and nucleus. Is expressed in several structures, including CNS glial cell; antennal anlage; antennal primordium; ganglia; and head epidermis primordium. Human ortholog(s) of this gene implicated in Charcot-Marie-Tooth disease type 4H. Orthologous to human FGD4 (FYVE, RhoGEF and PH domain containing 4) and ARHGEF39 (Rho guanine nucleotide exchange factor 39). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
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Genomic context

See RhoGEF4 in Genome Data Viewer
Location:
65F4-65F4; 3-20 cM
Exon count:
4
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (7321099..7323411, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (7314199..7316511, complement)

Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene antisense RNA:CR43470 Neighboring gene uncharacterized protein Neighboring gene unc-13-4A Neighboring gene uncharacterized protein Neighboring gene RAD50 interactor 1 Neighboring gene minerva

Genomic regions, transcripts, and products

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General protein information

Preferred Names
Rho guanine nucleotide exchange factor 4
Names
CG8606-PA
CG8606-PB
RhoGEF4-PA
RhoGEF4-PB

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_037436.4 Reference assembly

    Range
    7321099..7323411 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_139844.3NP_648101.1  Rho guanine nucleotide exchange factor 4, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_648101.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q86NY7, Q9VS45
    Related
    FBpp0076595
    Conserved Domains (3) summary
    pfam00169
    Location:277374
    PH; PH domain
    pfam00621
    Location:74244
    RhoGEF; RhoGEF domain
    cl17171
    Location:269311
    PH-like; Pleckstrin homology-like domain
  2. NM_168199.2NP_729232.1  Rho guanine nucleotide exchange factor 4, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_729232.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q86NY7, Q8IQ85
    Related
    FBpp0076596
    Conserved Domains (3) summary
    pfam00169
    Location:230327
    PH; PH domain
    pfam00621
    Location:27197
    RhoGEF; RhoGEF domain
    cl17171
    Location:222264
    PH-like; Pleckstrin homology-like domain