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Rint1 RAD50 interactor 1 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 38807, updated on 4-Jan-2025

Summary

Official Symbol
Rint1provided by FlyBase
Official Full Name
RAD50 interactor 1provided by FlyBase
Primary source
FLYBASE:FBgn0035762
Locus tag
Dmel_CG8605
See related
AllianceGenome:FB:FBgn0035762
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CG8605; Dmel\CG8605; Rint-1; rint1; Tip20
Summary
Involved in Golgi organization; cleavage furrow ingression; and male meiosis cytokinesis. Predicted to be located in endoplasmic reticulum. Predicted to be part of Dsl1/NZR complex. Is expressed in several structures, including adult head; embryonic/larval salivary gland; gut section; hindgut proper primordium; and posterior midgut primordium. Human ortholog(s) of this gene implicated in infantile liver failure syndrome. Orthologous to human RINT1 (RAD50 interactor 1). [provided by Alliance of Genome Resources, Jan 2025]
Orthologs
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Genomic context

See Rint1 in Genome Data Viewer
Location:
65F4-65F4; 3-20 cM
Exon count:
5
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (7323619..7326255)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (7316719..7319355)

Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene unc-13-4A Neighboring gene uncharacterized protein Neighboring gene Rho guanine nucleotide exchange factor 4 Neighboring gene minerva Neighboring gene uncharacterized protein Neighboring gene mutagen-sensitive 312

Genomic regions, transcripts, and products

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by FlyBase

Component Evidence Code Pubs
part_of Dsl1/NZR complex IBA
Inferred from Biological aspect of Ancestor
more info
 
part_of Dsl1/NZR complex IEA
Inferred from Electronic Annotation
more info
 
part_of Dsl1/NZR complex ISS
Inferred from Sequence or Structural Similarity
more info
 
located_in endoplasmic reticulum ISS
Inferred from Sequence or Structural Similarity
more info
 

General protein information

Preferred Names
RAD50 interactor 1
Names
CG8605-PA
RINT1 ortholog
Rint1-PA

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_037436.4 Reference assembly

    Range
    7323619..7326255
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_139845.3NP_648102.2  RAD50 interactor 1 [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_648102.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q961W7, Q9VS46
    UniProtKB/TrEMBL
    B6IDL7
    Related
    FBpp0076549
    Conserved Domains (1) summary
    pfam04437
    Location:259718
    RINT1_TIP1; RINT-1 / TIP-1 family