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mus312 mutagen-sensitive 312 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 38809, updated on 4-Jan-2025

Summary

Official Symbol
mus312provided by FlyBase
Official Full Name
mutagen-sensitive 312provided by FlyBase
Primary source
FLYBASE:FBgn0002909
Locus tag
Dmel_CG8601
See related
AllianceGenome:FB:FBgn0002909
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CG8601; Dmel\CG8601; mus(3)312; Mus312; MUS312
Summary
Involved in DNA repair; meiotic nuclear division; and oocyte fate determination. Part of Slx1-Slx4 complex. Human ortholog(s) of this gene implicated in Fanconi anemia complementation group P. Orthologous to human SLX4 (SLX4 structure-specific endonuclease subunit). [provided by Alliance of Genome Resources, Jan 2025]
Orthologs
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Genomic context

See mus312 in Genome Data Viewer
Location:
65F4-65F5; 3-20 cM
Exon count:
6
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (7329132..7333471)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (7322232..7326571)

Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene RAD50 interactor 1 Neighboring gene minerva Neighboring gene uncharacterized protein Neighboring gene wurmchen 1 Neighboring gene wurmchen 2 Neighboring gene Establishment of cohesion Neighboring gene lark

Genomic regions, transcripts, and products

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Process Evidence Code Pubs
involved_in DNA repair IEA
Inferred from Electronic Annotation
more info
 
involved_in DNA repair IGI
Inferred from Genetic Interaction
more info
PubMed 
involved_in DNA replication IEA
Inferred from Electronic Annotation
more info
 
involved_in homologous recombination IGI
Inferred from Genetic Interaction
more info
PubMed 
involved_in meiotic chromosome segregation IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in oocyte fate determination IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in reciprocal meiotic recombination IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in resolution of meiotic recombination intermediates IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in resolution of meiotic recombination intermediates IMP
Inferred from Mutant Phenotype
more info
PubMed 
Component Evidence Code Pubs
part_of Slx1-Slx4 complex IBA
Inferred from Biological aspect of Ancestor
more info
 
part_of Slx1-Slx4 complex IDA
Inferred from Direct Assay
more info
PubMed 
part_of Slx1-Slx4 complex IEA
Inferred from Electronic Annotation
more info
 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 
part_of protein-containing complex IDA
Inferred from Direct Assay
more info
PubMed 

General protein information

Preferred Names
mutagen-sensitive 312
Names
CG8601-PA
CG8601-PD
CG8601-PE
mus312-PA
mus312-PD
mus312-PE

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_037436.4 Reference assembly

    Range
    7329132..7333471
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_168200.2NP_729234.2  mutagen-sensitive 312, isoform E [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_729234.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A023GPN3
    Conserved Domains (1) summary
    pfam09494
    Location:10681125
    Slx4; Slx4 endonuclease
  2. NM_139847.4NP_648104.2  mutagen-sensitive 312, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_648104.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9VS48
    Related
    FBpp0076550
    Conserved Domains (1) summary
    pfam09494
    Location:10641121
    Slx4; Slx4 endonuclease
  3. NM_001144430.2NP_001137902.1  mutagen-sensitive 312, isoform D [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001137902.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    B7Z0D2, Q7YTZ1