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ZK185.4 Frag1/DRAM/Sfk1 [ Caenorhabditis elegans ]

Gene ID: 3896817, updated on 9-Dec-2024

Summary

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Official Symbol
ZK185.4
Official Full Name
Frag1/DRAM/Sfk1
Primary source
WormBase:WBGene00044480
Locus tag
CELE_ZK185.4
See related
AllianceGenome:WB:WBGene00044480
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be involved in GPI anchor biosynthetic process. Predicted to be located in Golgi membrane. Predicted to be active in endoplasmic reticulum membrane. [provided by Alliance of Genome Resources, Dec 2024]
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Genomic context

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See ZK185.4 in Genome Data Viewer
Location:
chromosome: IV
Exon count:
8
Sequence:
Chromosome: IV; NC_003282.8 (4530974..4533125, complement)

Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene Glycine N-acyltransferase-like protein Neighboring gene ncRNA Neighboring gene SLC41A/MgtE integral membrane domain-containing protein Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003282.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by WormBase

Process Evidence Code Pubs
involved_in GPI anchor biosynthetic process IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
  
is_active_in endoplasmic reticulum membrane IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Frag1/DRAM/Sfk1
NP_001033462.1
  • Confirmed by transcript evidence
NP_001294336.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003282.8 Reference assembly

    Range
    4530974..4533125 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001038373.3 → NP_001033462.1  Frag1/DRAM/Sfk1 [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001033462.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q3V5H7
    Conserved Domains (1) summary
    pfam10277
    Location:26 → 251
    Frag1; Frag1/DRAM/Sfk1 family

  2. NM_001307407.1 → NP_001294336.1  Frag1/DRAM/Sfk1 [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001294336.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    U4PB22
    Conserved Domains (1) summary
    pfam10277
    Location:1 → 131
    Frag1; Frag1/DRAM/Sfk1 family
Nucleotide Protein
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