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CG6709 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

Gene ID: 39166, updated on 18-Sep-2024

Summary

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Official Symbol
CG6709provided by FlyBase
Official Full Name
uncharacterized proteinprovided by FlyBase
Primary source
FLYBASE:FBgn0036056
Locus tag
Dmel_CG6709
See related
AllianceGenome:FB:FBgn0036056
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
Dmel\CG6709
Orthologs
all
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Genomic context

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See CG6709 in Genome Data Viewer
Location:
67D1-67D1; 3-32 cM
Exon count:
5
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (9893188..9894743, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (9886288..9887843, complement)

Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene TBP-associated factor 2 Neighboring gene antisense RNA:CR45875 Neighboring gene Calpain-B Neighboring gene Hezron Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene nudE

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Truncated TPPP - An Endopterygota-specific protein. Orosz F. Heliyon, 2021 May. PMID 34136696, Free PMC Article
  2. Transcriptomic analysis of inbreeding depression in cold-sensitive Drosophila melanogaster shows upregulation of the immune response. Vermeulen CJ, et al. J Evol Biol, 2013 Sep. PMID 23944235
  3. Next-generation large-scale binary protein interaction network for Drosophila melanogaster. Tang HW, et al. Nat Commun, 2023 Apr 15. PMID 37061542, Free PMC Article
  4. Genome-wide phenotypic RNAi screen in the Drosophila wing: phenotypic description of functional classes. López-Varea A, et al. G3 (Bethesda), 2021 Dec 8. PMID 34599810, Free PMC Article
  5. Phylostratigraphic bias creates spurious patterns of genome evolution. Moyers BA, et al. Mol Biol Evol, 2015 Jan. PMID 25312911, Free PMC Article

See all (23) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

General protein information

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Preferred Names
uncharacterized protein
Names
CG6709-PA
CG6709-PB
truncated TPPP

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_037436.4 Reference assembly

    Range
    9893188..9894743 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001104097.2 → NP_001097567.1  uncharacterized protein Dmel_CG6709, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001097567.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9VT66
    Conserved Domains (1) summary
    pfam05517
    Location:41 → 107
    p25-alpha; p25-alpha

  2. NM_140113.3 → NP_648370.1  uncharacterized protein Dmel_CG6709, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_648370.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9VT66
    Related
    FBpp0076089
    Conserved Domains (1) summary
    pfam05517
    Location:41 → 107
    p25-alpha; p25-alpha
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9VT66 Q9VT66

Gene LinkOut

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