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TfIIEalpha Transcription factor IIEalpha [ Drosophila melanogaster (fruit fly) ]

Gene ID: 39313, updated on 9-Dec-2024

Summary

Official Symbol
TfIIEalphaprovided by FlyBase
Official Full Name
Transcription factor IIEalphaprovided by FlyBase
Primary source
FLYBASE:FBgn0015828
Locus tag
Dmel_CG10415
See related
AllianceGenome:FB:FBgn0015828
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CG10415; Dmel\CG10415; dTFIIE-L; dTFIIEL; TfIIE; TFIIE; TFIIE-L; TfIIEa; TFIIEalpha
Summary
Involved in mRNA transcription by RNA polymerase II. Located in nucleus. Part of transcription factor TFIIE complex. Is expressed in organism. Orthologous to human GTF2E1 (general transcription factor IIE subunit 1). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
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Genomic context

See TfIIEalpha in Genome Data Viewer
Location:
68D2-68D2; 3-36 cM
Exon count:
3
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (11682038..11683805)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (11675138..11676905)

Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene antisense RNA:CR45882 Neighboring gene long non-coding RNA:CR45884 Neighboring gene antisense RNA:CR45885 Neighboring gene Sugar baby Neighboring gene Pallidin

Genomic regions, transcripts, and products

Pathways from PubChem

Interactions

General gene information

Gene Ontology Provided by FlyBase

Component Evidence Code Pubs
located_in nucleus PubMed 
part_of transcription factor TFIIE complex  
part_of transcription factor TFIIE complex PubMed 
part_of transcription factor TFIIE complex PubMed 

General protein information

Preferred Names
transcription factor IIEalpha
Names
CG10415-PA
TfIIEalpha-PA

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_037436.4 Reference assembly

    Range
    11682038..11683805
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_079302.4 → NP_524026.1  transcription factor IIEalpha [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_524026.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    O96880
    Related
    FBpp0075839
    Conserved Domains (3) summary
    smart00531
    Location:43 → 188
    TFIIE; Transcription initiation factor IIE
    pfam11521
    Location:357 → 429
    TFIIE-A_C; C-terminal general transcription factor TFIIE alpha
    cl21459
    Location:30 → 137
    HTH; Helix-turn-helix domains
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