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npm2.L nucleophosmin/nucleoplasmin 2 L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 394336, updated on 4-Jan-2025

Summary

Official Symbol
npm2.L
Official Full Name
nucleophosmin/nucleoplasmin 2 L homeolog
Primary source
Xenbase:XB-GENE-999551
Locus tag
XELAEV_18018751mg
See related
EnsemblRapid:ENSXLAG00005003297 AllianceGenome:Xenbase:XB-GENE-999551
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
npm2; npm-A
Summary
Predicted to act upstream of or within chromatin organization and single fertilization. Predicted to be located in nucleus. Is expressed in genital system. Orthologous to human NPM2 (nucleophosmin/nucleoplasmin 2). [provided by Alliance of Genome Resources, Jan 2025]
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Genomic context

See npm2.L in Genome Data Viewer
Location:
chromosome: 3L
Exon count:
10
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 3L NC_054375.1 (137865466..137871081)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 3L NC_030728.1 (122305389..122311026)

Chromosome 3L - NC_054375.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC121401586 Neighboring gene uncharacterized LOC108710627 Neighboring gene dematin actin binding protein L homeolog Neighboring gene FHF complex subunit HOOK interacting protein 2B L homeolog

Genomic regions, transcripts, and products

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

General gene information

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within chromatin organization IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within single fertilization IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
nucleoplasmin
Names
nucleoplasmin 2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001087558.1NP_001081027.1  nucleoplasmin

    See identical proteins and their annotated locations for NP_001081027.1

    Status: PROVISIONAL

    Source sequence(s)
    BC072778
    UniProtKB/Swiss-Prot
    P05221
    UniProtKB/TrEMBL
    A0A974DFF8, Q6GQG6
    Related
    ENSXLAP00005009807.1, ENSXLAT00005009965.1
    Conserved Domains (1) summary
    pfam03066
    Location:16123
    Nucleoplasmin; Nucleoplasmin

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054375.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    137865466..137871081
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018250763.2XP_018106252.1  nucleoplasmin isoform X1

    UniProtKB/Swiss-Prot
    P05221
    UniProtKB/TrEMBL
    A0A1L8H245, A0A974HUA0