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LP314_RS16885 helix-turn-helix domain-containing protein [ Lactiplantibacillus pentosus ]

Gene ID: 39462666, updated on 12-Dec-2024

Summary

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Gene symbol
LP314_RS16885
Gene description
helix-turn-helix domain-containing protein
Locus tag
LP314_RS16885
Gene type
protein coding
Organism
Lactiplantibacillus pentosus (strain: DSM 20314, culture-collection: DSM:20314, type-material: type strain of Lactobacillus pentosus)
Lineage
Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales; Lactobacillaceae; Lactiplantibacillus
Old locus tag
LP314_16885
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Genomic context

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Location:
plasmid: unnamed1

NZ_CP032758.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene pseudo Neighboring gene plasmid mobilization protein Neighboring gene type II toxin-antitoxin system RelE/ParE family toxin Neighboring gene site-specific integrase Neighboring gene type II toxin-antitoxin system Phd/YefM family antitoxin Neighboring gene type II toxin-antitoxin system YafQ family toxin

Genomic regions, transcripts, and products

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Genomic Sequence:
NZ_CP032758.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. XRE transcription factors conserved in Caulobacter and φCbK modulate adhesin development and phage production. McLaughlin M, et al. PLoS Genet, 2023 Nov. PMID 37972151, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
helix-turn-helix domain-containing protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_CP032758.1 Reference assembly

    Range
    12222..12491 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_001748276.1 MULTISPECIES: helix-turn-helix domain-containing protein [Lactobacillaceae]

    See identical proteins and their annotated locations for WP_001748276.1

    UniProtKB/TrEMBL
    A0A269Y687, A0A2I9DTV9, A0A2R3JSL7, A0A5R9BRX1, A0A837R477, A0AAE2RKT7, A0AAP1JS81, A0AAP5PVF1, A0AAQ0ENI1, C0XMT7
    Conserved Domains (1) summary
    cd00093
    Location:37 → 83
    HTH_XRE; Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.
Nucleotide Protein
Heading Accession and Version

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