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HSD17B1 hydroxysteroid 17-beta dehydrogenase 1 [ Gallus gallus (chicken) ]

Gene ID: 395641, updated on 17-Aug-2024

Summary

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Symbol
HSD17B1provided by CGNC
Full Name
hydroxysteroid 17-beta dehydrogenase 1provided by CGNC
Primary source
CGNC:49420
See related
Ensembl:ENSGALG00010021206
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Annotation information
Annotation category: suggests misassembly
Orthologs
human mouse all
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Genomic context

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See HSD17B1 in Genome Data Viewer
Location:
chromosome: 27
Exon count:
6
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 27 NC_052558.1 (4960560..4961998)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 27 NC_052599.1 (6122619..6124054)

Chromosome 27 - NC_052558.1Genomic Context describing neighboring genes Neighboring gene ATPase H+ transporting V0 subunit a1 Neighboring gene N-acetylglucosaminidase, alpha Neighboring gene MAX dimerization protein MLX Neighboring gene PSMC3 interacting protein Neighboring gene family with sequence similarity 134 member C

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The cDNA cloning and transient expression of an ovary-specific 17beta-hydroxysteroid dehydrogenase of chickens. Wajima Y, et al. Gene, 1999 Jun 11. PMID 10375623
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables estradiol 17-beta-dehydrogenase [NAD(P)+] activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in estrogen biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
17-beta-hydroxysteroid dehydrogenase type 1
Names
17-beta-hydroxysteroid dehydrogenase
NP_990168.1
XP_046789252.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_204837.1 → NP_990168.1  17-beta-hydroxysteroid dehydrogenase type 1

    See identical proteins and their annotated locations for NP_990168.1

    Status: PROVISIONAL

    Source sequence(s)
    AB002410
    UniProtKB/TrEMBL
    O12968, R4GHC4
    Related
    ENSGALP00010030578.1, ENSGALT00010051387.1
    Conserved Domains (2) summary
    cd09806
    Location:11 → 268
    type1_17beta-HSD-like_SDR_c; human estrogenic 17beta-hydroxysteroid dehydrogenase type 1 (type 1 17beta-HSD)-like, classical (c) SDRs
    pfam00106
    Location:12 → 208
    adh_short; short chain dehydrogenase

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052558.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    4960560..4961998
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052599.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    6122619..6124054
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046933296.1 → XP_046789252.1  17-beta-hydroxysteroid dehydrogenase type 1 isoform X1

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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