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HOXA2 homeobox A2 [ Gallus gallus (chicken) ]

Gene ID: 396055, updated on 17-Aug-2024

Summary

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Official Symbol
HOXA2provided by CGNC
Official Full Name
homeobox A2provided by CGNC
Primary source
CGNC:49629
See related
Ensembl:ENSGALG00010001790
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Also known as
HOXA-2
Orthologs
human mouse all
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Genomic context

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See HOXA2 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
2
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 2 NC_052533.1 (32485579..32487851, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 2 NC_052574.1 (32538194..32540470, complement)

Chromosome 2 - NC_052533.1Genomic Context describing neighboring genes Neighboring gene src kinase associated phosphoprotein 2 Neighboring gene homeobox A1 Neighboring gene homeobox A3 Neighboring gene uncharacterized LOC121109556 Neighboring gene homeobox A4 Neighboring gene homeobox A5

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Hoxa-2 expression in normal and transposed rhombomeres: independent regulation in the neural tube and neural crest. Prince V, et al. Development, 1994 Apr. PMID 7600967
  2. Molecular Analysis of the HOXA2-Dependent Degradation of RCHY1. Bridoux L, et al. PLoS One, 2015. PMID 26496426, Free PMC Article
  3. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article
  4. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
homeobox protein Hox-A2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_205150.3 → NP_990481.1  homeobox protein Hox-A2

    See identical proteins and their annotated locations for NP_990481.1

    Status: PROVISIONAL

    Source sequence(s)
    JAENSK010000037
    UniProtKB/Swiss-Prot
    Q08727
    Related
    ENSGALP00010002376.1, ENSGALT00010004079.1
    Conserved Domains (1) summary
    pfam00046
    Location:144 → 196
    Homeobox; Homeobox domain

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052533.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    32485579..32487851 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052574.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    32538194..32540470 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q08727.1 GenPept UniProtKB/Swiss-Prot:Q08727

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials