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CkIIalpha-i1 CKII-alpha subunit interactor-1 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 39721, updated on 9-Dec-2024

Summary

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Official Symbol
CkIIalpha-i1provided by FlyBase
Official Full Name
CKII-alpha subunit interactor-1provided by FlyBase
Primary source
FLYBASE:FBgn0015025
Locus tag
Dmel_CG6215
See related
AllianceGenome:FB:FBgn0015025
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CG6215; CKIIalpha-I1; CKIIalpha-iI; dCKIIalpha-i1; DmA35; Dmel\CG6215; ZFP47
Summary
Enables protein kinase binding activity. Predicted to be involved in regulation of DNA-templated transcription. Predicted to be located in nucleus. Is expressed in organism. [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
all
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Genomic context

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See CkIIalpha-i1 in Genome Data Viewer
Location:
72A1-72A1; 3-43 cM
Exon count:
2
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (15816979..15818621)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (15810079..15811721)

Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene flower Neighboring gene Decapping protein 2 Neighboring gene diablo

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Biallelic missense variants in ZBTB11 can cause intellectual disability in humans. Fattahi Z, et al. Hum Mol Genet, 2018 Sep 15. PMID 29893856
  2. A gene located at 72A in Drosophila melanogaster encodes a novel zinc-finger protein that interacts with protein kinase CK2. Kalive M, et al. Mol Cell Biochem, 2001 Nov. PMID 11827180
  3. Flower forms an extracellular code that reveals the fitness of a cell to its neighbors in Drosophila. Rhiner C, et al. Dev Cell, 2010 Jun 15. PMID 20627080
  4. Sox21b underlies the rapid diversification of a novel male genital structure between Drosophila species. Ridgway AM, et al. Curr Biol, 2024 Mar 11. PMID 38309269
  5. A genome-wide RNA interference screen reveals that variant histones are necessary for replication-dependent histone pre-mRNA processing. Wagner EJ, et al. Mol Cell, 2007 Nov 30. PMID 18042462

See all (27) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. ZFP47 is a new physiological partner and substrate of CK2.
    Title: A gene located at 72A in Drosophila melanogaster encodes a novel zinc-finger protein that interacts with protein kinase CK2.
Submit: New GeneRIF Correction

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IBA
Inferred from Biological aspect of Ancestor
more info
  
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IBA
Inferred from Biological aspect of Ancestor
more info
  
enables protein kinase binding IPI
Inferred from Physical Interaction
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
 PubMed 

General protein information

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Preferred Names
CKII-alpha subunit interactor-1
Names
CG6215-PA
CkIIalpha-i1-PA

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_037436.4 Reference assembly

    Range
    15816979..15818621
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_079372.4 → NP_524096.2  CKII-alpha subunit interactor-1 [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_524096.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q24161, Q9VUU3
    Related
    FBpp0075259
    Conserved Domains (1) summary
    sd00017
    Location:239 → 259
    ZF_C2H2; C2H2 Zn finger [structural motif]
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q24161 Q24161
Q9VUU3 Q9VUU3

Gene LinkOut

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