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ringer ringmaker [ Drosophila melanogaster (fruit fly) ]

Gene ID: 39813, updated on 9-Dec-2024

Summary

Official Symbol
ringerprovided by FlyBase
Official Full Name
ringmakerprovided by FlyBase
Primary source
FLYBASE:FBgn0266417
Locus tag
Dmel_CG45057
See related
AllianceGenome:FB:FBgn0266417
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CG34249; CG45027; CG45057; CG4893; Dmel\CG45057; HDC10482; mdcds_27436; TPPP
Old locus tag
Dmel_CG34249; Dmel_CG4893
Summary
Predicted to enable tubulin binding activity. Involved in microtubule cytoskeleton organization; positive regulation of axon regeneration; and regulation of synaptic assembly at neuromuscular junction. Located in axon; neuromuscular junction; and neuronal cell body. Is expressed in several structures, including adult head; adult heart; gut section; larval CNS neuron; and midline glial cell. Used to study Parkinson's disease. Orthologous to several human genes including TPPP (tubulin polymerization promoting protein) and TPPP3 (tubulin polymerization promoting protein family member 3). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
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Genomic context

See ringer in Genome Data Viewer
Location:
72E2-72E2; 3-44 cM
Exon count:
5
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (16354746..16359428, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (16347846..16354990, complement)

Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene antisense RNA:CR45894 Neighboring gene Threonyl-carbamoyl synthesis 3 Neighboring gene Photoreceptor dehydrogenase Neighboring gene Cuticular protein 72Ea Neighboring gene Cuticular protein 72Eb

Genomic regions, transcripts, and products

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables tubulin binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables tubulin binding IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in microtubule bundle formation IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in microtubule bundle formation IDA
Inferred from Direct Assay
more info
PubMed 
involved_in microtubule cytoskeleton organization IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in microtubule polymerization IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in microtubule polymerization IDA
Inferred from Direct Assay
more info
PubMed 
involved_in microtubule polymerization IEA
Inferred from Electronic Annotation
more info
 
involved_in positive regulation of axon regeneration IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in positive regulation of protein polymerization IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in regulation of synaptic assembly at neuromuscular junction IMP
Inferred from Mutant Phenotype
more info
PubMed 
Component Evidence Code Pubs
located_in axon IDA
Inferred from Direct Assay
more info
PubMed 
colocalizes_with microtubule IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in neuromuscular junction IMP
Inferred from Mutant Phenotype
more info
PubMed 
located_in neuronal cell body IDA
Inferred from Direct Assay
more info
PubMed 

General protein information

Preferred Names
ringmaker
Names
CG45057-PA
CG45057-PB
CG45057-PC
CG45057-PD
long-type TPPP
ringer-PA
ringer-PB
ringer-PC
ringer-PD
tubulin polymerization promoting protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_037436.4 Reference assembly

    Range
    16354746..16359428 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_140624.3NP_648881.1  ringmaker, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_648881.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9VV43
    UniProtKB/TrEMBL
    M9NFZ9
    Related
    FBpp0310766
    Conserved Domains (1) summary
    pfam05517
    Location:39184
    p25-alpha
  2. NM_001259863.2NP_001246792.1  ringmaker, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001246792.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9VV43
    UniProtKB/TrEMBL
    M9NFZ9
    Conserved Domains (1) summary
    pfam05517
    Location:39184
    p25-alpha
  3. NM_001275010.1NP_001261939.1  ringmaker, isoform D [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001261939.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9VV43
    UniProtKB/TrEMBL
    M9NFZ9
    Conserved Domains (1) summary
    pfam05517
    Location:39184
    p25-alpha
  4. NM_001275009.1NP_001261938.1  ringmaker, isoform C [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001261938.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9VV43
    UniProtKB/TrEMBL
    M9NFZ9
    Conserved Domains (1) summary
    pfam05517
    Location:39184
    p25-alpha