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CG11905 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

Gene ID: 39895, updated on 9-Dec-2024

Summary

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Official Symbol
CG11905provided by FlyBase
Official Full Name
uncharacterized proteinprovided by FlyBase
Primary source
FLYBASE:FBgn0036678
Locus tag
Dmel_CG11905
See related
AllianceGenome:FB:FBgn0036678
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
Dmel\CG11905
Summary
Is expressed in several structures, including embryonic dorsal epidermis; embryonic head epidermis; embryonic/larval posterior spiracle; primary segmental tracheal branch primordium; and primary tracheal branch. [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
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Genomic context

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See CG11905 in Genome Data Viewer
Location:
73D6-73D7; 3-45 cM
Exon count:
7
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (16928381..16935536, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (16921481..16928636, complement)

Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene Limpet Neighboring gene long non-coding RNA:CR45898 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene Cuticular protein 73D Neighboring gene Odorant-binding protein 73a Neighboring gene Oxoglutarate dehydrogenase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Identification of genetic suppressors of the Sin3A knockdown wing phenotype. Swaminathan A, et al. PLoS One, 2012. PMID 23166712, Free PMC Article
  2. Genome-wide analyses of Shavenbaby target genes reveals distinct features of enhancer organization. Menoret D, et al. Genome Biol, 2013 Aug 23. PMID 23972280, Free PMC Article
  3. Somatic, germline and sex hierarchy regulated gene expression during Drosophila metamorphosis. Lebo MS, et al. BMC Genomics, 2009 Feb 13. PMID 19216785, Free PMC Article
  4. A microtubule interactome: complexes with roles in cell cycle and mitosis. Hughes JR, et al. PLoS Biol, 2008 Apr 22. PMID 18433294, Free PMC Article
  5. Nociceptor-Enriched Genes Required for Normal Thermal Nociception. Honjo K, et al. Cell Rep, 2016 Jul 12. PMID 27346357, Free PMC Article

See all (26) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

General protein information

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Preferred Names
uncharacterized protein
Names
CG11905-PA
CG11905-PB
CG11905-PC
CG11905-PD
CG11905-PE
CG11905-PF
CG11905-PG
CG11905-PH
CG11905-PI
CG11905-PL

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_037436.4 Reference assembly

    Range
    16928381..16935536 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_168695.4 → NP_730215.2  uncharacterized protein Dmel_CG11905, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_730215.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q8IGK1, Q8IQQ2
    Related
    FBpp0075060
    Conserved Domains (1) summary
    pfam15999
    Location:249 → 305
    DUF4774; Domain of unknown function (DUF4774)

  2. NM_001259880.2 → NP_001246809.1  uncharacterized protein Dmel_CG11905, isoform L [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001246809.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    M9NFI4
    Conserved Domains (1) summary
    pfam15999
    Location:250 → 306
    DUF4774; Domain of unknown function (DUF4774)

  3. NM_001104155.3 → NP_001097625.1  uncharacterized protein Dmel_CG11905, isoform I [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001097625.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q8IGK1, Q8IQQ2
    Conserved Domains (1) summary
    pfam15999
    Location:249 → 305
    DUF4774; Domain of unknown function (DUF4774)

  4. NM_168696.4 → NP_730216.2  uncharacterized protein Dmel_CG11905, isoform F [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_730216.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q8IGK1, Q8IQQ2
    Related
    FBpp0075065
    Conserved Domains (1) summary
    pfam15999
    Location:249 → 305
    DUF4774; Domain of unknown function (DUF4774)

  5. NM_168697.4 → NP_730217.1  uncharacterized protein Dmel_CG11905, isoform C [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_730217.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q8IQQ1
    Related
    FBpp0075061
    Conserved Domains (1) summary
    pfam15999
    Location:251 → 308
    DUF4774; Domain of unknown function (DUF4774)

  6. NM_001104154.3 → NP_001097624.1  uncharacterized protein Dmel_CG11905, isoform H [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001097624.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q8IQQ1
    Conserved Domains (1) summary
    pfam15999
    Location:251 → 308
    DUF4774; Domain of unknown function (DUF4774)

  7. NM_168698.4 → NP_730218.1  uncharacterized protein Dmel_CG11905, isoform E [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_730218.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q8IQQ1
    Related
    FBpp0075064
    Conserved Domains (1) summary
    pfam15999
    Location:251 → 308
    DUF4774; Domain of unknown function (DUF4774)

  8. NM_168700.3 → NP_730220.1  uncharacterized protein Dmel_CG11905, isoform G [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_730220.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q95TR5, Q9VVC1
    Related
    FBpp0075062
    Conserved Domains (1) summary
    pfam15999
    Location:495 → 549
    DUF4774; Domain of unknown function (DUF4774)

  9. NM_140679.4 → NP_648936.1  uncharacterized protein Dmel_CG11905, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_648936.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q95TR5, Q9VVC1
    Related
    FBpp0075063
    Conserved Domains (1) summary
    pfam15999
    Location:495 → 549
    DUF4774; Domain of unknown function (DUF4774)

  10. NM_168699.3 → NP_730219.1  uncharacterized protein Dmel_CG11905, isoform D [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_730219.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q95TR5, Q9VVC1
    Related
    FBpp0075066
    Conserved Domains (1) summary
    pfam15999
    Location:495 → 549
    DUF4774; Domain of unknown function (DUF4774)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
M9NFI4 M9NFI4
Q8IGK1 Q8IGK1
Q8IQQ1 Q8IQQ1
Q9VVC1 Q9VVC1

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