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CG6479 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

Gene ID: 39930, updated on 9-Dec-2024

Summary

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Official Symbol
CG6479provided by FlyBase
Official Full Name
uncharacterized proteinprovided by FlyBase
Primary source
FLYBASE:FBgn0036710
Locus tag
Dmel_CG6479
See related
AllianceGenome:FB:FBgn0036710
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
Dmel\CG6479
Summary
Predicted to be active in membrane. Is expressed in adult head. Orthologous to human TMEM209 (transmembrane protein 209). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
all
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Genomic context

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See CG6479 in Genome Data Viewer
Location:
74A5-74A5; 3-45 cM
Exon count:
5
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (17337172..17339262, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (17330272..17332362, complement)

Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene long non-coding RNA:CR44563 Neighboring gene long non-coding RNA:CR44564 Neighboring gene transfer RNA:Proline-CGG 2-2 Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Identification of critical host mitochondrion-associated genes during Ehrlichia chaffeensis infections. Von Ohlen T, et al. Infect Immun, 2012 Oct. PMID 22851751, Free PMC Article
  2. Widespread colocalization of the Drosophila histone acetyltransferase homolog MYST5 with DREF and insulator proteins at active genes. Heseding C, et al. Chromosoma, 2017 Feb. PMID 26894919
  3. Stress-sensitive dynamics of miRNAs and Elba1 in Drosophila embryogenesis. Örkenby L, et al. Mol Syst Biol, 2023 May 9. PMID 36938679, Free PMC Article
  4. Identification of Drosophila gene products required for phagocytosis of Candida albicans. Stroschein-Stevenson SL, et al. PLoS Biol, 2006 Jan. PMID 16336044, Free PMC Article
  5. The genetic makeup of the Drosophila piRNA pathway. Handler D, et al. Mol Cell, 2013 Jun 6. PMID 23665231, Free PMC Article

See all (27) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by FlyBase

Component Evidence Code Pubs
is_active_in membrane IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
uncharacterized protein
Names
CG6479-PA
CG6479-PB
CG6479-PC

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_037436.4 Reference assembly

    Range
    17337172..17339262 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001275052.1 → NP_001261981.1  uncharacterized protein Dmel_CG6479, isoform C [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001261981.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    M9PFY2, Q95SF0
    Conserved Domains (1) summary
    pfam09786
    Location:13 → 535
    CytochromB561_N; Cytochrome B561, N terminal

  2. NM_140711.3 → NP_648968.2  uncharacterized protein Dmel_CG6479, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_648968.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q95SF0, Q9VVF4
    Related
    FBpp0075006
    Conserved Domains (1) summary
    pfam09786
    Location:13 → 541
    CytochromB561_N; Cytochrome B561, N terminal

  3. NM_168723.2 → NP_730256.1  uncharacterized protein Dmel_CG6479, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_730256.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q8IQQ8, Q95SF0
    Related
    FBpp0075007
    Conserved Domains (1) summary
    pfam09786
    Location:9 → 537
    CytochromB561_N; Cytochrome B561, N terminal
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
M9PFY2 M9PFY2
Q8IQQ8 Q8IQQ8
Q95SF0 Q95SF0
Q9VVF4 Q9VVF4

Gene LinkOut

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