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KCNJ2-AS1 KCNJ2 antisense RNA 1 [ Homo sapiens (human) ]

Gene ID: 400617, updated on 17-Sep-2024

Summary

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Official Symbol
KCNJ2-AS1provided by HGNC
Official Full Name
KCNJ2 antisense RNA 1provided by HGNC
Primary source
HGNC:HGNC:43720
See related
Ensembl:ENSG00000267365 AllianceGenome:HGNC:43720
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See KCNJ2-AS1 in Genome Data Viewer
Location:
17q24.3
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 17 NC_000017.11 (70166961..70169402, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 17 NC_060941.1 (71045282..71047723, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 17 NC_000017.10 (68163102..68165543, complement)

Chromosome 17 - NC_000017.11Genomic Context describing neighboring genes Neighboring gene potassium inwardly rectifying channel subfamily J member 16 Neighboring gene uncharacterized LOC124904052 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr17:68124354-68125553 Neighboring gene uncharacterized LOC105371882 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 8907 Neighboring gene potassium inwardly rectifying channel subfamily J member 2 Neighboring gene calmodulin 2 pseudogene 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. Ota T, et al. Nat Genet, 2004 Jan. PMID 14702039

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See variants in ClinVar

See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Markers

Other Names

  • KCNJ2 antisense RNA 1 (head to head)
  • KCNJ2 antisense RNA 1 (non-protein coding)

Clone Names

  • FLJ36644

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_036534.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AK093963
    Related
    ENST00000590966.2

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000017.11 Reference GRCh38.p14 Primary Assembly

    Range
    70166961..70169402 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060941.1 Alternate T2T-CHM13v2.0

    Range
    71045282..71047723 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Chemical Information
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Research Materials