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CG13248 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

Gene ID: 40254, updated on 2-Nov-2024

Summary

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Official Symbol
CG13248provided by FlyBase
Official Full Name
uncharacterized proteinprovided by FlyBase
Primary source
FLYBASE:FBgn0036984
Locus tag
Dmel_CG13248
See related
AllianceGenome:FB:FBgn0036984
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CAT-4; dCat-4; Dmel\CG13248
Summary
Predicted to enable amino acid transmembrane transporter activity. Predicted to be involved in amino acid transmembrane transport. Predicted to be located in membrane. Predicted to be active in plasma membrane. Is expressed in several structures, including adult head; brain; embryonic central brain neurons; larval central nervous system; and larval nervous system. Orthologous to human SLC7A4 (solute carrier family 7 member 4). [provided by Alliance of Genome Resources, Nov 2024]
Orthologs
all
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Genomic context

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See CG13248 in Genome Data Viewer
Location:
77C1-77C2; 3-47 cM
Exon count:
2
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (20407103..20410566, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (20400203..20403666, complement)

Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene long non-coding RNA:CR45677 Neighboring gene tribbles Neighboring gene long non-coding RNA:CR45973 Neighboring gene zye Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Tadr is an axonal histidine transporter required for visual neurotransmission in Drosophila. Han Y, et al. Elife, 2022 Mar 1. PMID 35229720, Free PMC Article
  2. The Drosophila Transcription Factor Dimmed Affects Neuronal Growth and Differentiation in Multiple Ways Depending on Neuron Type and Developmental Stage. Liu Y, et al. Front Mol Neurosci, 2016. PMID 27790090, Free PMC Article
  3. The Drosophila Prosecretory Transcription Factor dimmed Is Dynamically Regulated in Adult Enteroendocrine Cells and Protects Against Gram-Negative Infection. Beebe K, et al. G3 (Bethesda), 2015 May 20. PMID 25999585, Free PMC Article
  4. Transcriptional Reorganization of Drosophila Motor Neurons and Their Muscular Junctions toward a Neuroendocrine Phenotype by the bHLH Protein Dimmed. Luo J, et al. Front Mol Neurosci, 2017. PMID 28855860, Free PMC Article
  5. Molecular organization of Drosophila neuroendocrine cells by Dimmed. Park D, et al. Curr Biol, 2011 Sep 27. PMID 21885285, Free PMC Article

See all (40) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables amino acid transmembrane transporter activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables amino acid transmembrane transporter activity ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
enables transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in amino acid transmembrane transport ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
involved_in amino acid transport IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
uncharacterized protein
Names
CG13248-PA

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_037436.4 Reference assembly

    Range
    20407103..20410566 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_140962.2 → NP_649219.1  uncharacterized protein Dmel_CG13248 [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_649219.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q6NNV9, Q9VPG2
    Related
    FBpp0077892
    Conserved Domains (2) summary
    TIGR00906
    Location:32 → 603
    2A0303; cationic amino acid transport permease
    pfam13906
    Location:551 → 601
    AA_permease_C; C-terminus of AA_permease
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9VPG2 Q9VPG2

Gene LinkOut

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