U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

CG13248 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

Gene ID: 40254, updated on 9-Dec-2024

Summary

Official Symbol
CG13248provided by FlyBase
Official Full Name
uncharacterized proteinprovided by FlyBase
Primary source
FLYBASE:FBgn0036984
Locus tag
Dmel_CG13248
See related
AllianceGenome:FB:FBgn0036984
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CAT-4; dCat-4; Dmel\CG13248
Summary
Predicted to enable amino acid transmembrane transporter activity. Predicted to be involved in amino acid transmembrane transport. Predicted to be located in membrane. Predicted to be active in plasma membrane. Is expressed in several structures, including adult head; brain; embryonic central brain neurons; larval central nervous system; and larval nervous system. Orthologous to human SLC7A4 (solute carrier family 7 member 4). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See CG13248 in Genome Data Viewer
Location:
77C1-77C2; 3-47 cM
Exon count:
2
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (20407103..20410566, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (20400203..20403666, complement)

Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene long non-coding RNA:CR45677 Neighboring gene tribbles Neighboring gene long non-coding RNA:CR45973 Neighboring gene zye Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

General gene information

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables amino acid transmembrane transporter activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables amino acid transmembrane transporter activity ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
enables transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in amino acid transmembrane transport ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
involved_in amino acid transport IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
 

General protein information

Preferred Names
uncharacterized protein
Names
CG13248-PA

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_037436.4 Reference assembly

    Range
    20407103..20410566 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_140962.2NP_649219.1  uncharacterized protein Dmel_CG13248 [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_649219.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q6NNV9, Q9VPG2
    Related
    FBpp0077892
    Conserved Domains (2) summary
    TIGR00906
    Location:32603
    2A0303; cationic amino acid transport permease
    pfam13906
    Location:551601
    AA_permease_C; C-terminus of AA_permease