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CG5104 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

Gene ID: 40280, updated on 4-Jan-2025

Summary

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Official Symbol
CG5104provided by FlyBase
Official Full Name
uncharacterized proteinprovided by FlyBase
Primary source
FLYBASE:FBgn0037009
Locus tag
Dmel_CG5104
See related
AllianceGenome:FB:FBgn0037009
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
BcDNA:RH26504; Dmel\CG5104
Summary
Predicted to be involved in vesicle-mediated transport. Predicted to be located in membrane. Orthologous to human SFT2D1 (SFT2 domain containing 1) and SFT2D2 (SFT2 domain containing 2). [provided by Alliance of Genome Resources, Jan 2025]
Orthologs
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Genomic context

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See CG5104 in Genome Data Viewer
Location:
77C6-77C6; 3-47 cM
Exon count:
4
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (20521009..20522434)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (20514109..20515534)

Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene BNIP3 Neighboring gene mitochondrial transcription termination factor 3 Neighboring gene Phosphatidylserine synthase Neighboring gene NUBP iron-sulfur cluster assembly factor 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A Hopscotch-chromatin connection. Betz A, et al. Nat Genet, 2006 Sep. PMID 16941005
  2. Molecular analysis of flies selected for aggressive behavior. Dierick HA, et al. Nat Genet, 2006 Sep. PMID 16906161
  3. An anti-inflammatory transcriptional cascade conserved from flies to humans. Pavlidaki A, et al. Cell Rep, 2022 Oct 18. PMID 36261018
  4. A misexpression screen to identify regulators of Drosophila larval hemocyte development. Stofanko M, et al. Genetics, 2008 Sep. PMID 18757933, Free PMC Article
  5. Cell-Type-Specific Transcriptome Analysis in the Drosophila Mushroom Body Reveals Memory-Related Changes in Gene Expression. Crocker A, et al. Cell Rep, 2016 May 17. PMID 27160913, Free PMC Article

See all (31) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by FlyBase

Process Evidence Code Pubs
involved_in vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
uncharacterized protein
Names
CG5104-PB

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_037436.4 Reference assembly

    Range
    20521009..20522434
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_140984.3 → NP_649241.1  uncharacterized protein Dmel_CG5104 [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_649241.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1B2AJS5, Q9VPD4
    Related
    FBpp0077867
    Conserved Domains (1) summary
    pfam04178
    Location:58 → 155
    Got1; Got1/Sft2-like family
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9VPD4 Q9VPD4

Gene LinkOut

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