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Rcd2 Reduction in Cnn dots 2 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 40283, updated on 9-Dec-2024

Summary

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Official Symbol
Rcd2provided by FlyBase
Official Full Name
Reduction in Cnn dots 2provided by FlyBase
Primary source
FLYBASE:FBgn0037012
Locus tag
Dmel_CG4786
See related
AllianceGenome:FB:FBgn0037012
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CG4786; CT15369; Dmel\CG4786
Summary
Involved in centriole replication. Located in plasma membrane. [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
all
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Genomic context

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See Rcd2 in Genome Data Viewer
Location:
77C7-77D1; 3-47 cM
Exon count:
3
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (20527972..20540417, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (20521072..20533517, complement)

Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene Phosphatidylserine synthase Neighboring gene NUBP iron-sulfur cluster assembly factor 2 Neighboring gene uncharacterized protein Neighboring gene long non-coding RNA:CR46326 Neighboring gene long noncoding RNA: testis-specific 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A genome-wide RNAi screen to dissect centriole duplication and centrosome maturation in Drosophila. Dobbelaere J, et al. PLoS Biol, 2008 Sep 16. PMID 18798690, Free PMC Article
  2. The genetic basis of natural variation in mushroom body size in Drosophila melanogaster. Zwarts L, et al. Nat Commun, 2015 Dec 11. PMID 26656654, Free PMC Article
  3. Genome-wide association analysis of oxidative stress resistance in Drosophila melanogaster. Weber AL, et al. PLoS One, 2012. PMID 22496853, Free PMC Article
  4. Drosophila muller f elements maintain a distinct set of genomic properties over 40 million years of evolution. Leung W, et al. G3 (Bethesda), 2015 Mar 4. PMID 25740935, Free PMC Article
  5. mRNA-Associated Processes and Their Influence on Exon-Intron Structure in Drosophila melanogaster. Lepennetier G, et al. G3 (Bethesda), 2016 Jun 1. PMID 27172210, Free PMC Article

See all (22) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by FlyBase

Process Evidence Code Pubs
involved_in centriole replication IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
reduction in Cnn dots 2
Names
CG4786-PA
Rcd2-PA

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_037436.4 Reference assembly

    Range
    20527972..20540417 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_140987.3 → NP_649244.3  reduction in Cnn dots 2 [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_649244.3

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q8SXY5, Q9VPD1
    Related
    FBpp0077871
    Conserved Domains (1) summary
    smart00214
    Location:114 → 168
    VWC; von Willebrand factor (vWF) type C domain
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q8SXY5 Q8SXY5

Gene LinkOut

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