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Cpr78E Cuticular protein 78E [ Drosophila melanogaster (fruit fly) ]

Gene ID: 40408, updated on 4-Jan-2025

Summary

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Official Symbol
Cpr78Eprovided by FlyBase
Official Full Name
Cuticular protein 78Eprovided by FlyBase
Primary source
FLYBASE:FBgn0037114
Locus tag
Dmel_CG7160
See related
AllianceGenome:FB:FBgn0037114
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
BcDNA:LP06027; CG7160; Cpi78E; DmelCpr78E; Dmel\CG7160
Summary
Predicted to be a structural constituent of chitin-based larval cuticle. Predicted to be involved in chitin-based cuticle development. Predicted to be active in chitin-based extracellular matrix. Is expressed in wing disc. [provided by Alliance of Genome Resources, Jan 2025]
Orthologs
all
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Genomic context

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See Cpr78E in Genome Data Viewer
Location:
78E2-78E2; 3-47 cM
Exon count:
2
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (21666452..21666980, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (21659552..21660080, complement)

Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene long non-coding RNA:CR45956 Neighboring gene uncharacterized protein Neighboring gene long non-coding RNA:CR43977 Neighboring gene long non-coding RNA:CR45920 Neighboring gene mir-316 stem loop

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Growth inhibition and differences in protein profiles in azadirachtin-treated Drosophila melanogaster larvae. Wang H, et al. Electrophoresis, 2014 Apr. PMID 24458307
  2. Predicting spatial and temporal gene expression using an integrative model of transcription factor occupancy and chromatin state. Wilczynski B, et al. PLoS Comput Biol, 2012. PMID 23236268, Free PMC Article
  3. Drosophila Sirt2/mammalian SIRT3 deacetylates ATP synthase β and regulates complex V activity. Rahman M, et al. J Cell Biol, 2014 Jul 21. PMID 25023514, Free PMC Article
  4. SAGA-mediated H2B deubiquitination controls the development of neuronal connectivity in the Drosophila visual system. Weake VM, et al. EMBO J, 2008 Jan 23. PMID 18188155, Free PMC Article
  5. The Spalt Transcription Factors Generate the Transcriptional Landscape of the Drosophila melanogaster Wing Pouch Central Region. Organista MF, et al. PLoS Genet, 2015 Aug. PMID 26241320, Free PMC Article

See all (36) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables structural constituent of chitin-based larval cuticle IBA
Inferred from Biological aspect of Ancestor
more info
  
enables structural constituent of chitin-based larval cuticle ISM
Inferred from Sequence Model
more info
 PubMed 
Process Evidence Code Pubs
involved_in chitin-based cuticle development ISM
Inferred from Sequence Model
more info
 PubMed 
Component Evidence Code Pubs
is_active_in chitin-based extracellular matrix IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in chitin-based extracellular matrix ISM
Inferred from Sequence Model
more info
 PubMed 

General protein information

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Preferred Names
cuticular protein 78E
Names
CG7160-PA
Cpr78E-PA

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_037436.4 Reference assembly

    Range
    21666452..21666980 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_141088.2 → NP_649345.1  cuticular protein 78E [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_649345.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9VP00
    Related
    FBpp0078117
    Conserved Domains (1) summary
    pfam00379
    Location:47 → 102
    Chitin_bind_4; Insect cuticle protein
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9VP00 Q9VP00

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