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DMBT1 deleted in malignant brain tumors 1 [ Bos taurus (domestic cattle) ]

Gene ID: 404104, updated on 1-Jan-2025

Summary

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Gene symbol
DMBT1
Gene description
deleted in malignant brain tumors 1
See related
BGD:BT22909
Gene type
protein coding
RefSeq status
MODEL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Also known as
MUCIN
Orthologs
human mouse all
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Genomic context

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See DMBT1 in Genome Data Viewer
Location:
chromosome: 26
Exon count:
70
Annotation release Status Assembly Chr Location
RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 26 NC_037353.1 (42390383..42492218)

Chromosome 26 - NC_037353.1Genomic Context describing neighboring genes Neighboring gene pleckstrin homology domain containing A1 Neighboring gene HtrA serine peptidase 1 Neighboring gene uncharacterized LOC100849037 Neighboring gene microRNA mir-10225b Neighboring gene mucin-13 Neighboring gene carbohydrate-binding protein AQN-1 Neighboring gene uncharacterized LOC132343972 Neighboring gene spermadhesin 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037353.1 Chromosome 26 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Dominette sequence data
  • BioProject: PRJNA294306
  • Analysis date: Tue Dec 17 08:57:05 2024

Bibliography

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Related articles in PubMed

  1. Bovine gall-bladder mucin contains two distinct tandem repeating sequences: evidence for scavenger receptor cysteine-rich repeats. Nunes DP, et al. Biochem J, 1995 Aug 15. PMID 7646470, Free PMC Article
  2. Deleted in Malignant Brain Tumors 1 is a versatile mucin-like molecule likely to play a differential role in digestive tract cancer. Mollenhauer J, et al. Cancer Res, 2001 Dec 15. PMID 11751412
  3. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
  4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables serine-type endopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in zymogen activation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
deleted in malignant brain tumors 1 protein; scavenger receptor cysteine-rich domain-containing protein DMBT1
Names
gall-bladder mucin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037353.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    42390383..42492218
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_059882093.1 → XP_059738076.1  scavenger receptor cysteine-rich domain-containing protein DMBT1

Nucleotide Protein Strain
Heading Accession and Version

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