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ZPBP2 zona pellucida binding protein 2 [ Gallus gallus (chicken) ]

Gene ID: 404532, updated on 3-Dec-2024

Summary

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Official Symbol
ZPBP2provided by CGNC
Official Full Name
zona pellucida binding protein 2provided by CGNC
Primary source
CGNC:10131
See related
Ensembl:ENSGALG00010024591
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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See ZPBP2 in Genome Data Viewer
Location:
chromosome: 27
Exon count:
10
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 27 NC_052558.1 (4271090..4277244)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 27 NC_052599.1 (5433210..5439083)

Chromosome 27 - NC_052558.1Genomic Context describing neighboring genes Neighboring gene growth factor receptor bound protein 7 Neighboring gene retinol dehydrogenase 8 like 1 Neighboring gene IKAROS family zinc finger 3 Neighboring gene leucine rich repeat containing 3C Neighboring gene ORMDL sphingolipid biosynthesis regulator 3 Neighboring gene uncharacterized LOC121107691 Neighboring gene gasdermin A

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Loss of zona pellucida binding proteins in the acrosomal matrix disrupts acrosome biogenesis and sperm morphogenesis. Lin YN, et al. Mol Cell Biol, 2007 Oct. PMID 17664285, Free PMC Article
  2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article
  3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in acrosome assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in binding of sperm to zona pellucida IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in acrosomal vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of zona pellucida receptor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zona pellucida-binding protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_206987.3 → NP_996870.3  zona pellucida-binding protein 2 precursor

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000365
    UniProtKB/Swiss-Prot
    Q6PVW7
    UniProtKB/TrEMBL
    A0A8V0ZTB9
    Related
    ENSGALP00010036762.1, ENSGALT00010060002.1
    Conserved Domains (1) summary
    pfam07354
    Location:173 → 352
    Sp38; Zona-pellucida-binding protein (Sp38)

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052558.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    4271090..4277244
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040653147.2 → XP_040509081.1  zona pellucida-binding protein 2 isoform X1

    Conserved Domains (1) summary
    pfam07354
    Location:338 → 517
    Sp38; Zona-pellucida-binding protein (Sp38)

RNA

  1. XR_005841931.2 RNA Sequence

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052599.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    5433210..5439083
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046933329.1 → XP_046789285.1  zona pellucida-binding protein 2 isoform X1

RNA

  1. XR_006937183.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q6PVW7.1 GenPept UniProtKB/Swiss-Prot:Q6PVW7

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials