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CG12581 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

Gene ID: 40522, updated on 9-Dec-2024

Summary

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Official Symbol
CG12581provided by FlyBase
Official Full Name
uncharacterized proteinprovided by FlyBase
Primary source
FLYBASE:FBgn0037213
Locus tag
Dmel_CG12581
See related
AllianceGenome:FB:FBgn0037213
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
Dmel\CG12581
Summary
Is expressed in several structures, including adult head; antennal primordium; epithelium; gut section; and head epidermis primordium. [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
all
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Genomic context

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See CG12581 in Genome Data Viewer
Location:
81F5-81F6; 3-47.1 cM
Exon count:
3
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (4174632..4186751)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (354..12473)

Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene long non-coding RNA:CR46431 Neighboring gene pseudo Neighboring gene Drosulfakinin Neighboring gene beta-Mannosidase Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. New mutant alleles for Spargel/dPGC-1 highlights the function of Spargel RRM domain in oogenesis and expands the role of Spargel in embryogenesis and intracellular transport. Roy SD, et al. G3 (Bethesda), 2023 Aug 30. PMID 37369430, Free PMC Article
  2. Antagonistic pleiotropy for life-history traits at the gene expression level. Bochdanovits Z, et al. Proc Biol Sci, 2004 Feb 7. PMID 15101424, Free PMC Article
  3. The Organization of Pericentromeric Heterochromatin in Polytene Chromosome 3 of the Drosophilamelanogaster Line with the Rif1(1); SuUR(ES) Su(var)3-9(06) Mutations Suppressing Underreplication. Zykova T, et al. Cells, 2021 Oct 20. PMID 34831030, Free PMC Article
  4. Trachealess (Trh) regulates all tracheal genes during Drosophila embryogenesis. Chung S, et al. Dev Biol, 2011 Dec 1. PMID 21963537, Free PMC Article
  5. Gene expression profiling of brakeless mutant Drosophila embryos. Crona F, et al. Data Brief, 2015 Dec. PMID 26509186, Free PMC Article

See all (32) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

mobile_element

  • Loc: 4176340-4176454 mobile_element_type = transposon:INE-1{}3014
  • Loc: 4177922-4178499 mobile_element_type = transposon:INE-1{}4671
  • Loc: 4180883-4181432 mobile_element_type = transposon:INE-1{}3016
  • Loc: 4183433-4183628 mobile_element_type = transposon:INE-1{}3018
  • Loc: 4185556-4186323 mobile_element_type = transposon:INE-1{}3615
  • Loc: 4185668-4185691 mobile_element_type = transposon:1360{}3725
  • Loc: 4186419-4186709 mobile_element_type = transposon:INE-1{}4673

General protein information

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Preferred Names
uncharacterized protein
Names
CG12581-PA
CG12581-PB

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033777.3 Reference assembly

    Range
    4174632..4186751
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_164313.2 → NP_730781.1  uncharacterized protein Dmel_CG12581, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_730781.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    B8A3W3, Q8T953, Q9VMY3
    Related
    FBpp0078601
    Conserved Domains (1) summary
    cd01217
    Location:3 → 168
    PTB_CG12581; CG12581 Phosphotyrosine-binding (PTB) domain

  2. NM_141178.4 → NP_649435.2  uncharacterized protein Dmel_CG12581, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_649435.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    B8A3W3, Q8T953, Q9VMY3
    Related
    FBpp0078602
    Conserved Domains (1) summary
    cd01217
    Location:3 → 168
    PTB_CG12581; CG12581 Phosphotyrosine-binding (PTB) domain
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q8T953 Q8T953
Q95TE1 Q95TE1
Q9VMY3 Q9VMY3

Gene LinkOut

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