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FLA28_gp1 RNA polymerase [ Lelystad virus ]

Gene ID: 40526526, updated on 18-Aug-2023

Summary

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Gene symbol
FLA28_gp1
Gene description
RNA polymerase
Locus tag
FLA28_gp1
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Lelystad virus
Lineage
Viruses; Riboviria; Nidovirales; Arnidovirineae; Arteriviridae; Variarterivirinae; Betaarterivirus; Eurpobartevirus; Betaarterivirus suid 1
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Genomic context

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Sequence:
NC_043487.1 (222..7412)

NC_043487.1Genomic Context describing neighboring genes Neighboring gene RNA polymerase Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_043487.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Lelystad virus, the causative agent of porcine epidemic abortion and respiratory syndrome (PEARS), is related to LDV and EAV. Meulenberg JJ, et al. Virology, 1993 Jan. PMID 8517032, Free PMC Article

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
RNA polymerase

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_043487.1 Reference assembly

    Range
    222..7412
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_009667147.1 RNA polymerase [Lelystad virus]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    Q5YBT7
    Conserved Domains (7) summary
    pfam05412
    Location:420 → 526
    Peptidase_C33; Equine arterivirus Nsp2-type cysteine proteinase
    pfam05579
    Location:1601 → 1897
    Peptidase_S32; Equine arteritis virus serine endopeptidase S32
    pfam05410
    Location:57 → 161
    Peptidase_C31; Porcine arterivirus-type cysteine proteinase alpha
    pfam05411
    Location:258 → 384
    Peptidase_C32; Equine arteritis virus putative proteinase
    pfam14757
    Location:887 → 988
    NSP2-B_epitope; Immunogenic region of nsp2 protein of arterivirus polyprotein
    pfam14758
    Location:680 → 884
    NSP2_assoc; Non-essential region of nsp2 of arterivirus polyprotein
    pfam16749
    Location:2084 → 2210
    Arteri_nsp7a; Arterivirus nonstructural protein 7 alpha
Nucleotide Protein
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