U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

hkb huckebein [ Drosophila melanogaster (fruit fly) ]

Gene ID: 40549, updated on 17-Dec-2024

Summary

Official Symbol
hkbprovided by FlyBase
Official Full Name
huckebeinprovided by FlyBase
Primary source
FLYBASE:FBgn0261434
Locus tag
Dmel_CG9768
See related
AllianceGenome:FB:FBgn0261434
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
5953; anon-82B3; CG9768; Dmel\CG9768; gurt; Hkb; HKB
Summary
Enables sequence-specific DNA binding activity and transcription corepressor binding activity. Involved in several processes, including germ cell migration; negative regulation of transcription by RNA polymerase II; and nervous system development. Located in nucleus. Is expressed in several structures, including CNS glial cell; anlage in statu nascendi; embryonic procephalic segment; head epidermis primordium; and neuroblasts. Human ortholog(s) of this gene implicated in amelogenesis imperfecta type 1K and congenital dyserythropoietic anemia type IV. Orthologous to several human genes including KLF1 (KLF transcription factor 1); KLF14 (KLF transcription factor 14); and KLF16 (KLF transcription factor 16). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See hkb in Genome Data Viewer
Location:
82A4-82A4; 3-47.1 cM
Exon count:
2
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (4345015..4346646, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (170737..172368, complement)

Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene S-phase kinase-associated protein 2 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene long non-coding RNA:CR44922

Genomic regions, transcripts, and products

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

  • Annotated by Drosophila Heterochromatin Genome Project, Lawrence Berkeley National Lab, http://www.dhgp.org

Gene Ontology Provided by FlyBase

Process Evidence Code Pubs
involved_in cell fate specification TAS
Traceable Author Statement
more info
PubMed 
involved_in central nervous system development IGI
Inferred from Genetic Interaction
more info
PubMed 
involved_in ectoderm and mesoderm interaction NAS
Non-traceable Author Statement
more info
PubMed 
involved_in endoderm development IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in endoderm formation TAS
Traceable Author Statement
more info
PubMed 
involved_in germ cell migration IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in germ cell migration TAS
Traceable Author Statement
more info
PubMed 
involved_in glial cell differentiation IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in membrane organization IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in negative regulation of transcription by RNA polymerase II IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in posterior midgut invagination NAS
Non-traceable Author Statement
more info
PubMed 
involved_in regulation of transcription by RNA polymerase II IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in salivary gland development TAS
Traceable Author Statement
more info
PubMed 
involved_in salivary gland morphogenesis IGI
Inferred from Genetic Interaction
more info
PubMed 
involved_in salivary gland morphogenesis IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in tube morphogenesis IMP
Inferred from Mutant Phenotype
more info
PubMed 
Component Evidence Code Pubs
located_in nucleus IDA
Inferred from Direct Assay
more info
PubMed 

General protein information

Preferred Names
huckebein
Names
CG9768-PA
gurtelchen
hkb-PA
huckbein
hucklebein

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033777.3 Reference assembly

    Range
    4345015..4346646 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_079497.4NP_524221.1  huckebein [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_524221.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9VN10
    Related
    FBpp0078591
    Conserved Domains (4) summary
    COG5048
    Location:195261
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:197217
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:195217
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:239264
    zf-H2C2_2; Zinc-finger double domain