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ylbE DUF1116 domain-containing protein YlbE [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 4056025, updated on 3-Dec-2024

Summary

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Official Symbol
ylbE
Official Full Name
DUF1116 domain-containing protein YlbE
Primary source
ECOCYC:G6288
Locus tag
b4572
See related
ASAP:ABE-0285105
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
b0519; b4507; ECK0512; G0-10554
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Genomic context

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Sequence:
NC_000913.3 (548357..549616)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene ureidoglycolate dehydrogenase Neighboring gene putative oxamate carbamoyltransferase FdrA Neighboring gene DUF2877 domain-containing protein YlbF Neighboring gene putative carbamate kinase Neighboring gene 5-(carboxyamino)imidazole ribonucleotide synthase Neighboring gene N(5)-carboxyaminoimidazole ribonucleotide mutase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new Escherichia coli gene, fdrA, identified by suppression analysis of dominant negative FtsH mutations. Akiyama Y, et al. Mol Gen Genet, 1995 Nov 15. PMID 7500942
  2. New genes implicated in the protection of anaerobically grown Escherichia coli against nitric oxide. Justino MC, et al. J Biol Chem, 2005 Jan 28. PMID 15546870
  3. Multiple stressor-induced proteome responses of Escherichia coli BL21(DE3). Han KY, et al. J Proteome Res, 2008 May. PMID 18363324
  4. A functional update of the Escherichia coli K-12 genome. Serres MH, et al. Genome Biol, 2001. PMID 11574054, Free PMC Article
  5. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article

See all (7) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
DUF1116 domain-containing protein YlbE

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    548357..549616
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_009029994.1 DUF1116 domain-containing protein YlbE [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for YP_009029994.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A8S7CK06
    Conserved Domains (1) summary
    pfam06545
    Location:87 → 302
    DUF1116; Protein of unknown function (DUF1116)
Nucleotide Protein
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